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利用核和叶绿体 DNA 序列对所有穗花杉属(红豆杉科)物种的系统发育分析。

A phylogeny of all species of Arceuthobium (Viscaceae) using nuclear and chloroplast DNA sequences.

机构信息

Department of Plant Biology and Center for Systematic Biology, Southern Illinois University, Carbondale, Illinois 62901-6509 USA;

出版信息

Am J Bot. 2004 Jan;91(1):125-38. doi: 10.3732/ajb.91.1.125.

Abstract

The genus Arceuthobium (dwarf mistletoes, Viscaceae) comprises 42 species that parasitize hosts in Pinaceae and Cupressaceae in the Old and New Worlds. Maximum parsimony analyses were conducted on two data partitions (separately and combined): nuclear ribosomal internal transcribed spacer (ITS) sequences for all 42 currently recognized species and chloroplast trnT-L-F sequences for 34 New World species. The Old and New World species were phylogenetically distinct using ITS, thus making subgenus Arceuthobium paraphyletic. Arceuthobium pendens and A. guatemalense comprise the basalmost clade of subgenus Vaginata, characterized by the presence of flabellate secondary branching. The trnT-L-F sequences, which vary widely in length depending upon taxon, contain three times less phylogenetic signal than ITS, although homoplasy for this partition is lower. Several of the clades obtained from analysis of nuclear ITS sequences are also recovered using trnT-L-F sequences such as A. guatemalense and A. pendens, the A. rubrum group, the A. vaginatum group, and the A. campylopodum group. The ITS + trnT-L-F tree is well resolved except for four internal nodes. A revised classification of the genus is discussed that recognizes only monophyletic species that are well differentiated by molecular data.

摘要

银胶菊属(矮生槲寄生,桑寄生科)包含 42 种寄生在新旧世界松科和柏科植物上的物种。对两个数据分区(分别和组合)进行了最大简约分析:所有 42 种现有公认物种的核核糖体内部转录间隔区(ITS)序列和 34 种新世界物种的叶绿体 trnT-L-F 序列。使用 ITS,新旧世界物种在系统发育上是不同的,因此使 Arceuthobium 亚属成为并系。Arceuthobium pendens 和 A. guatemalense 构成了 Vaginata 亚属最基部的分支,其特征是存在扇形的次生分枝。trnT-L-F 序列的长度因分类群而异,变化很大,尽管该分区的同形性较低,但所含的系统发育信号比 ITS 少三倍。从核 ITS 序列分析中获得的几个分支也可以通过 trnT-L-F 序列恢复,例如 A. guatemalense 和 A. pendens、A. rubrum 组、A. vaginatum 组和 A. campylopodum 组。除了四个内部节点外,ITS + trnT-L-F 树的分辨率很好。讨论了对该属的修订分类,该分类仅承认通过分子数据很好地区分的单系物种。

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