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基于 ETS、ITS、RPL16 和 TRNL-F 核苷酸序列的景天科风车草属(Graptopetalum)分子系统发育研究。

A molecular phylogenetic study of Graptopetalum (Crassulaceae) based on ETS, ITS, RPL16, and TRNL-F nucleotide sequences.

机构信息

Instituto de Ecología, A.C. Apartado Postal 63, 91000 Xalapa, Veracruz, Mexico;

出版信息

Am J Bot. 2004 Jul;91(7):1099-104. doi: 10.3732/ajb.91.7.1099.

Abstract

Nuclear ETS and ITS, as well as plastid rpl16 and trnL-F DNA sequences were used to determine relationships among species of Graptopetalum (Crassulaceae) and closely related genera. Graptopetalum is member of a group of taxa restricted to North America, one of the centers of diversity of Crassulaceae; however, their phylogenetic relationships are not yet understood. Nineteen species of Graptopetalum and 24 species from nine other genera of Crassulaceae were sampled for use in three separate parsimony analyses: ITS alone, ETS alone, and a combined nuclear + plastid DNA analysis using all four gene regions. The ETS data set had the highest number of parsimony-informative sites, about 30% more than in ITS, but the most fully resolved tree resulted when the four DNA regions were combined. Only four subclades of the tree received moderate to strong bootstrap support, one of which includes all species of Graptopetalum having a single whorl of stamens. However, Graptopetalum is not monophyletic. Instead, Tacitus bellus and select species of Cremnophila, Sedum, and Echeveria are interspersed among species of Graptopetalum and show evidence of grouping according to geographical range of distribution more so than habit or floral morphology.

摘要

核 ETS 和 ITS,以及质体 rpl16 和 trnL-F DNA 序列被用于确定 Graptopetalum(景天科)及其密切相关属的物种之间的关系。Graptopetalum 是局限于北美的一组分类群的成员,也是景天科多样性中心之一;然而,它们的系统发育关系尚不清楚。为了进行三个独立简约分析,我们从 19 种 Graptopetalum 物种和 9 种其他景天科属的 24 种物种中采样:单独的 ITS、单独的 ETS 和使用所有四个基因区域的核+质体 DNA 联合分析。ETS 数据集具有最多的简约信息位点,比 ITS 多约 30%,但当四个 DNA 区域结合使用时,生成的树得到了最完全的解析。该树只有四个亚分支得到了中等至强的自举支持,其中一个亚分支包括具有一轮雄蕊的所有 Graptopetalum 物种。然而,Graptopetalum 不是单系的。相反,Tacitus bellus 和 Cremnophila、Sedum 和 Echeveria 的一些选定物种散布在 Graptopetalum 物种中,并且根据分布范围而不是习性或花形态显示出分组的证据更为明显。

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