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用于链间交联修复的同源重组检测

Homologous recombination assay for interstrand cross-link repair.

作者信息

Nakanishi Koji, Cavallo Francesca, Brunet Erika, Jasin Maria

机构信息

Developmental Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.

出版信息

Methods Mol Biol. 2011;745:283-91. doi: 10.1007/978-1-61779-129-1_16.

DOI:10.1007/978-1-61779-129-1_16
PMID:21660700
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3261721/
Abstract

DNA interstrand cross-links (ICLs) covalently link both strands of the DNA duplex, impeding cellular processes like DNA replication. Homologous recombination (HR) is considered to be a major pathway for the repair of ICLs in mammalian cells as mutants for HR components are highly sensitive to DNA-damaging agents that cause ICLs. This chapter describes GFP assays to measure HR following site-specific ICL formation with psoralen through DNA triplex technology. This approach can be used to determine the genetic requirements for ICL-induced HR in relation to those involved in HR repair of other DNA lesions such as double-strand breaks.

摘要

DNA链间交联(ICL)共价连接DNA双链的两条链,阻碍DNA复制等细胞过程。同源重组(HR)被认为是哺乳动物细胞中ICL修复的主要途径,因为HR组分的突变体对导致ICL的DNA损伤剂高度敏感。本章描述了通过DNA三链体技术用补骨脂素进行位点特异性ICL形成后测量HR的绿色荧光蛋白(GFP)检测方法。这种方法可用于确定ICL诱导的HR相对于参与其他DNA损伤(如双链断裂)的HR修复的遗传需求。

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本文引用的文献

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Homology-directed Fanconi anemia pathway cross-link repair is dependent on DNA replication.同源定向的范可尼贫血通路交联修复依赖于 DNA 复制。
Nat Struct Mol Biol. 2011 Apr;18(4):500-3. doi: 10.1038/nsmb.2029. Epub 2011 Mar 20.
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Using synthetic DNA interstrand crosslinks to elucidate repair pathways and identify new therapeutic targets for cancer chemotherapy.利用合成 DNA 链间交联物来阐明修复途径,并为癌症化疗确定新的治疗靶点。
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Role of homologous recombination in DNA interstrand crosslink repair.同源重组在 DNA 链间交联修复中的作用。
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A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia.全基因组规模的 DNA 修复 RNAi 筛选鉴定出 SPG48 是一种与遗传性痉挛性截瘫相关的新基因。
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