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从绿鬣蜥(Anolis carolinensis)中分离出的β-防御素样肽的生物信息学和分子特征。

Bioinformatic and molecular characterization of beta-defensins-like peptides isolated from the green lizard Anolis carolinensis.

机构信息

Department of Biology, via U. Bassi 58/B, University of Padova, 25131 Padova, Italy.

出版信息

Dev Comp Immunol. 2012 Jan;36(1):222-9. doi: 10.1016/j.dci.2011.05.004. Epub 2011 May 31.

Abstract

The high resistance of lizards to infections indicates that anti-microbial peptides may be involved. Through the analysis of the green lizard (Anolis carolinensis) genome and the expressed sequence tag (EST) libraries 32 beta-defensin-like-peptides have been identified. The level of expression of some of these genes in different tissues has been determined by semi-quantitative RT-PCR. Gene expression and structure analysis suggest the presence of alternative splicing mechanisms, with a number of exons ranging from two to four, similar to that for beta-defensins genes in mammals. Lizard beta-defensin-like peptides present the characteristic cysteine-motif identified in mammalian and avian beta-defensins. Phylogenetic analysis indicates that some lizard beta-defensins-like peptides are related to crotamine and crotamin-like peptides of snakes and lizards suggesting that beta-defensins and venomous peptides have a common ancestor gene.

摘要

蜥蜴对感染的高抵抗力表明,抗菌肽可能参与其中。通过对绿蜥蜴(Anolis carolinensis)基因组和表达序列标签(EST)文库的分析,已经鉴定出 32 种β-防御素样肽。通过半定量 RT-PCR 测定了这些基因在不同组织中的表达水平。基因表达和结构分析表明存在选择性剪接机制,一些外显子的数量从两个到四个不等,类似于哺乳动物的β-防御素基因。蜥蜴β-防御素样肽具有在哺乳动物和鸟类β-防御素中发现的特征半胱氨酸基序。系统发育分析表明,一些蜥蜴β-防御素样肽与蛇和蜥蜴的克罗塔明和克罗塔明样肽有关,这表明β-防御素和毒液肽具有共同的祖先基因。

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