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甲基-5-氨基-4-氰基-3-(甲硫基)-1H-吡唑-1-碳二硫代酸酯的振动分配、正则坐标分析、B3LYP 计算和构象分析。

Vibrational assignments, normal coordinate analysis, B3LYP calculations and conformational analysis of methyl-5-amino-4-cyano-3-(methylthio)-1H-pyrazole-1-carbodithioate.

机构信息

Department of Chemistry, Al-Azhar University (Men's Campus), Nasr City 11884, Cairo, Egypt.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2011 Sep;79(5):1722-30. doi: 10.1016/j.saa.2011.05.044. Epub 2011 May 23.

Abstract

The Raman and infrared spectra of solid methyl-5-amino-4-cyano-3-(methylthio)-1H-pyrazole-1-carbodithioate (MAMPC, C7H8N4S3) were measured in the spectral range of 3700-100 cm(-1) and 4000-200 cm(-1) with a resolution of 4 and 0.5 cm(-1), respectively. Room temperature 13C NMR and (1)H NMR spectra from room temperature down to -60 °C were also recorded. As a result of internal rotation around C-N and/or C-S bonds, eighteen rotational isomers are suggested for the MAMPC molecule (Cs symmetry). DFT/B3LYP and MP2 calculations were carried out up to 6-311++G(d,p) basis sets to include polarization and diffusion functions. The results favor conformer 1 in the solid (experimentally) and gaseous (theoretically) phases. For conformer 1, the two -CH3 groups are directed towards the nitrogen atoms (pyrazole ring) and CS, while the -NH2 group retains sp2 hybridization and C-CN bond is quasi linear. To support NMR spectral assignments, chemical shifts (δ) were predicted at the B3LYP/6-311+G(2d,p) level using the method of Gauge-Invariant Atomic Orbital (GIAO) method. Moreover, the solvent effect was included via the Polarizable Continuum Model (PCM). Additionally, both infrared and Raman spectra were predicted using B3LYP/6-31G(d) calculations. The recorded vibrational, 1H and 13C NMR spectral data favors conformer 1 in both the solid phase and in solution. Aided by normal coordinate analysis and potential energy distributions, confident vibrational assignments for observed bands have been proposed. Moreover, the CH3 barriers to internal rotations were investigated. The results are discussed herein are compared with similar molecules whenever appropriate.

摘要

固态甲基-5-氨基-4-氰基-3-(甲硫基)-1H-吡唑-1-碳二硫代酸酯(MAMPC,C7H8N4S3)的拉曼和红外光谱在 3700-100 cm(-1) 和 4000-200 cm(-1) 的光谱范围内进行了测量,分辨率分别为 4 和 0.5 cm(-1)。还记录了室温下的 13C NMR 和 (1)H NMR 光谱,从室温降至-60°C。由于 C-N 和/或 C-S 键的内部旋转,MAMPC 分子(Cs 对称)建议有十八个旋转异构体。使用 DFT/B3LYP 和 MP2 计算方法,计算了高达 6-311++G(d,p)基组的极化和扩散函数,以包括极化和扩散函数。结果表明,在固态(实验)和气态(理论)相中,构象 1 占优势。对于构象 1,两个-CH3 基团指向氮原子(吡唑环)和 CS,而-NH2 基团保持 sp2 杂化,C-CN 键几乎呈线性。为了支持 NMR 光谱的归属,使用 Gauge-Invariant Atomic Orbital(GIAO)方法在 B3LYP/6-311+G(2d,p)水平上预测了化学位移(δ)。此外,通过极化连续模型(PCM)包含溶剂效应。此外,使用 B3LYP/6-31G(d)计算预测了红外和拉曼光谱。记录的振动、1H 和 13C NMR 光谱数据表明,在固态和溶液中,构象 1 都占优势。通过正则坐标分析和势能分布的辅助,对观察到的谱带提出了有信心的振动归属。此外,还研究了-CH3 内部旋转的势垒。本文讨论的结果与适当情况下的类似分子进行了比较。

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