Duan Hai-Rong, Qiu De-Bin, Gong Cheng-Liang, Huang Mo-Li
Center for Systems Biology of Soochow University, Suzhou 215006, China.
Yi Chuan. 2011 Jun;33(6):636-47. doi: 10.3724/sp.j.1005.2011.00636.
For research on genetic characters and evolutionary origin of the genome of baculoviruses, a comprehensive homology search and phylogenetic analysis of the complete genomes of Bombyx mori NPV and Bombyx mori were used. Three horizontally transferred genes (inhibitor of apoptosis, chitinase, and UDP-glucosyltransferase) were identified, and there was evidence that all of these genes were derived from the insect host. The results of analysis showed lots of differences between the features of horizontal transferred genes and the ones of whole genomic genes, such as nucleotide composition, codon usagebias and selection pressure. These results reconfirmed that the horizontally transferred genes are exogenous. The analysis of gene function suggested that horizontally transferred genes acquired from an ancestral host insect can increase the efficiency of baculoviruses transmission.
为了研究杆状病毒基因组的遗传特征和进化起源,对家蚕核型多角体病毒和家蚕的全基因组进行了全面的同源性搜索和系统发育分析。鉴定出三个水平转移基因(凋亡抑制因子、几丁质酶和UDP-葡萄糖基转移酶),并且有证据表明所有这些基因均来源于昆虫宿主。分析结果表明,水平转移基因的特征与全基因组基因的特征存在许多差异,如核苷酸组成、密码子使用偏好和选择压力等。这些结果再次证实水平转移基因是外源的。基因功能分析表明,从祖先宿主昆虫获得的水平转移基因可提高杆状病毒的传播效率。