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西奥多·E·伍德沃德奖:非洲人群中乳糖酶持久性单核苷酸多态性调节肠道细胞培养中的启动子活性。

Theodore E. Woodward Award: lactase persistence SNPs in African populations regulate promoter activity in intestinal cell culture.

作者信息

Sibley Eric, Ahn Jong Kun

机构信息

Department of Pediatrics, Division of Gastroenterology, Hepatology and Nutrition Stanford University School of Medicine, 300 Pasteur Drive, G310, Stanford, CA 94305, USA.

出版信息

Trans Am Clin Climatol Assoc. 2011;122:155-65.

PMID:21686221
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3116366/
Abstract

Lactase-phlorizin hydrolase, lactase, is the intestinal enzyme responsible for the digestion of the milk sugar lactose. The majority of the world's human population experiences a decline in expression of the lactase gene by late childhood (lactase non-persistence). Individuals with lactase persistence, however, continue to express high levels of the lactase gene throughout adulthood. Lactase persistence is a heritable autosomal dominant condition and has been strongly correlated with several single nucleotide polymorphisms (SNPs) located ∼14 kb upstream of the lactase gene in different ethnic populations: -13910T in Europeans and -13907G, -13915G, and -14010C in several African populations. The coincidence of the four SNPs clustering within 100 bp strongly suggests that this region mediates the lactase non-persistence/persistence phenotype. Having previously characterized the European SNP, we aimed to determine whether the African SNPs similarly mediate a functional role in regulating the lactase promoter. Human intestinal Caco-2 cells were transfected with lactase SNP/promoter-reporter constructs and assayed for promoter activity. The -13907G and -13915G SNPs result in a significant enhancement of lactase promoter activity relative to the ancestral lactase non-persistence genotype. Such differential regulation by the SNPs is consistent with a causative role in the mechanism specifying the lactase persistence phenotype.

摘要

乳糖酶 - 根皮苷水解酶,即乳糖酶,是负责消化乳糖这种乳类糖分的肠道酶。世界上大多数人口在童年后期乳糖酶基因的表达会下降(乳糖酶不持续性)。然而,具有乳糖酶持续性的个体在成年期仍持续高水平表达乳糖酶基因。乳糖酶持续性是一种可遗传的常染色体显性性状,并且在不同种族人群中,它与位于乳糖酶基因上游约14 kb处的几个单核苷酸多态性(SNP)密切相关:欧洲人群中的 -13910T以及几个非洲人群中的 -13907G、-13915G和 -14010C。这四个SNP在100 bp范围内聚集的巧合强烈表明该区域介导了乳糖酶不持续性/持续性表型。在先前对欧洲SNP进行了特征描述之后,我们旨在确定非洲的这些SNP是否同样在调节乳糖酶启动子中发挥功能作用。用乳糖酶SNP/启动子 - 报告基因构建体转染人肠道Caco - 2细胞,并检测启动子活性。相对于祖传的乳糖酶不持续性基因型,-13907G和 -13915G这两个SNP导致乳糖酶启动子活性显著增强。SNP的这种差异调节与在决定乳糖酶持续性表型的机制中起因果作用是一致的。

相似文献

1
Theodore E. Woodward Award: lactase persistence SNPs in African populations regulate promoter activity in intestinal cell culture.西奥多·E·伍德沃德奖:非洲人群中乳糖酶持久性单核苷酸多态性调节肠道细胞培养中的启动子活性。
Trans Am Clin Climatol Assoc. 2011;122:155-65.
2
Lactase persistence DNA variant enhances lactase promoter activity in vitro: functional role as a cis regulatory element.乳糖酶持续性DNA变异体在体外增强乳糖酶启动子活性:作为顺式调控元件的功能作用
Hum Mol Genet. 2003 Sep 15;12(18):2333-40. doi: 10.1093/hmg/ddg244. Epub 2003 Jul 22.
3
The human lactase persistence-associated SNP -13910*T enables in vivo functional persistence of lactase promoter-reporter transgene expression.人类乳糖酶持续存在相关 SNP-13910*T 使乳糖酶启动子-报告基因转基因表达在体内具有功能性持续性。
Hum Genet. 2012 Jul;131(7):1153-9. doi: 10.1007/s00439-012-1140-z. Epub 2012 Jan 19.
4
13915*G DNA polymorphism associated with lactase persistence in Africa interacts with Oct-1.13915*G DNA 多态性与非洲的乳糖酶持续性相关,与 Oct-1 相互作用。
Hum Genet. 2011 Jan;129(1):111-3. doi: 10.1007/s00439-010-0898-0. Epub 2010 Oct 20.
5
PCR-RFLP genotyping assay for a lactase persistence polymorphism upstream of the lactase-phlorizin hydrolase gene.乳糖酶 - 根皮苷水解酶基因上游乳糖酶持续性多态性的聚合酶链反应 - 限制性片段长度多态性基因分型检测
Genet Test. 2004 Summer;8(2):190-3. doi: 10.1089/gte.2004.8.190.
6
Genetic origins of lactase persistence and the spread of pastoralism in Africa.乳糖酶持续存在的遗传起源和非洲畜牧业的传播。
Am J Hum Genet. 2014 Apr 3;94(4):496-510. doi: 10.1016/j.ajhg.2014.02.009. Epub 2014 Mar 13.
7
The T allele of a single-nucleotide polymorphism 13.9 kb upstream of the lactase gene (LCT) (C-13.9kbT) does not predict or cause the lactase-persistence phenotype in Africans.乳糖酶基因(LCT)上游13.9千碱基处单核苷酸多态性(C-13.9kbT)的T等位基因并不能预测或导致非洲人的乳糖酶持久性表型。
Am J Hum Genet. 2004 Jun;74(6):1102-10. doi: 10.1086/421050. Epub 2004 Apr 20.
8
Genetics of Lactose Intolerance: An Updated Review and Online Interactive World Maps of Phenotype and Genotype Frequencies.乳糖不耐受的遗传学:表型和基因型频率的最新综述和在线互动世界地图。
Nutrients. 2020 Sep 3;12(9):2689. doi: 10.3390/nu12092689.
9
An upstream polymorphism associated with lactase persistence has increased enhancer activity.与乳糖酶持续性相关的一个上游多态性增加了增强子活性。
Gastroenterology. 2003 Dec;125(6):1686-94. doi: 10.1053/j.gastro.2003.09.031.
10
Lactose and lactase--who is lactose intolerant and why?乳糖与乳糖酶——谁是乳糖不耐受者以及原因何在?
J Pediatr Gastroenterol Nutr. 2007 Dec;45 Suppl 2:S131-7. doi: 10.1097/MPG.0b013e31812e68f6.

引用本文的文献

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Ileal Lactase Expression Associates with Lactase Persistence Genotypes.回肠乳糖酶表达与乳糖酶持续存在基因型相关。
Nutrients. 2021 Apr 17;13(4):1340. doi: 10.3390/nu13041340.
2
Diversity of lactase persistence alleles in Ethiopia: signature of a soft selective sweep.埃塞俄比亚乳糖持续存在等位基因的多样性:软选择清扫的特征。
Am J Hum Genet. 2013 Sep 5;93(3):538-44. doi: 10.1016/j.ajhg.2013.07.008. Epub 2013 Aug 29.

本文引用的文献

1
13915*G DNA polymorphism associated with lactase persistence in Africa interacts with Oct-1.13915*G DNA 多态性与非洲的乳糖酶持续性相关,与 Oct-1 相互作用。
Hum Genet. 2011 Jan;129(1):111-3. doi: 10.1007/s00439-010-0898-0. Epub 2010 Oct 20.
2
Multiple rare variants as a cause of a common phenotype: several different lactase persistence associated alleles in a single ethnic group.多种罕见变异导致常见表型:单一族群中存在多个乳糖持续存在相关等位基因。
J Mol Evol. 2009 Dec;69(6):579-88. doi: 10.1007/s00239-009-9301-y. Epub 2009 Nov 24.
3
Frequency of LCT -13910C>T single nucleotide polymorphism associated with adult-type hypolactasia/lactase persistence among Brazilians of different ethnic groups.不同种族巴西人中与成人型低乳糖血症/乳糖酶持久性相关的LCT -13910C>T单核苷酸多态性的频率
Nutr J. 2009 Oct 2;8:46. doi: 10.1186/1475-2891-8-46.
4
Molecular genetics of human lactase deficiencies.人类乳糖酶缺乏症的分子遗传学。
Ann Med. 2009;41(8):568-75. doi: 10.1080/07853890903121033.
5
Screening of variants for lactase persistence/non-persistence in populations from South Africa and Ghana.对南非和加纳人群中乳糖酶持久性/非持久性变体的筛查。
BMC Genet. 2009 Jul 5;10:31. doi: 10.1186/1471-2156-10-31.
6
Prevalence of adult-type hypolactasia as diagnosed with genetic and lactose hydrogen breath tests in Hungarians.匈牙利人通过基因检测和乳糖氢呼气试验诊断出的成人型低乳糖酶血症患病率。
Eur J Clin Nutr. 2009 Jul;63(7):909-12. doi: 10.1038/ejcn.2008.74. Epub 2009 Jan 21.
7
Lactose digestion and the evolutionary genetics of lactase persistence.乳糖消化与乳糖酶持久性的进化遗传学
Hum Genet. 2009 Jan;124(6):579-91. doi: 10.1007/s00439-008-0593-6. Epub 2008 Nov 26.
8
Lactase persistence-related genetic variant: population substructure and health outcomes.乳糖酶持久性相关基因变异:人群亚结构与健康结局
Eur J Hum Genet. 2009 Mar;17(3):357-67. doi: 10.1038/ejhg.2008.156. Epub 2008 Sep 17.
9
Independent introduction of two lactase-persistence alleles into human populations reflects different history of adaptation to milk culture.两种乳糖酶持久性等位基因独立引入人类群体反映了对牛奶文化不同的适应历史。
Am J Hum Genet. 2008 Jan;82(1):57-72. doi: 10.1016/j.ajhg.2007.09.012.
10
The lactase gene -13910T allele can not predict the lactase-persistence phenotype in north China.乳糖酶基因-13910T等位基因不能预测中国北方人群的乳糖酶持续表达表型。
Asia Pac J Clin Nutr. 2007;16(4):598-601.