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从网络角度看子宫颈癌细胞系的蛋白质组学模式。

Proteomic patterns of cervical cancer cell lines, a network perspective.

作者信息

Higareda-Almaraz Juan Carlos, Enríquez-Gasca María del Rocío, Hernández-Ortiz Magdalena, Resendis-Antonio Osbaldo, Encarnación-Guevara Sergio

机构信息

Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Apdo, Postal 565-A, Cuernavaca, Morelos, CP 62210, México.

出版信息

BMC Syst Biol. 2011 Jun 22;5:96. doi: 10.1186/1752-0509-5-96.

Abstract

BACKGROUND

Cervical cancer is a major mortality factor in the female population. This neoplastic is an excellent model for studying the mechanisms involved in cancer maintenance, because the Human Papilloma Virus (HPV) is the etiology factor in most cases. With the purpose of characterizing the effects of malignant transformation in cellular activity, proteomic studies constitute a reliable way to monitor the biological alterations induced by this disease. In this contextual scheme, a systemic description that enables the identification of the common events between cell lines of different origins, is required to distinguish the essence of carcinogenesis.

RESULTS

With this study, we sought to achieve a systemic perspective of the common proteomic profile of six cervical cancer cell lines, both positive and negative for HPV, and which differ from the profile corresponding to the non-tumourgenic cell line, HaCaT. Our objectives were to identify common cellular events participating in cancer maintenance, as well as the establishment of a pipeline to work with proteomic-derived results. We analyzed by means of 2D SDS-PAGE and MALDI-TOF mass spectrometry the protein extracts of six cervical cancer cell lines, from which we identified a consensus of 66 proteins. We call this group of proteins, the "central core of cervical cancer". Starting from this core set of proteins, we acquired a PPI network that pointed, through topological analysis, to some proteins that may well be playing a central role in the neoplastic process, such as 14-3-3ζ. In silico overrepresentation analysis of transcription factors pointed to the overexpression of c-Myc, Max and E2F1 as key transcription factors involved in orchestrating the neoplastic phenotype.

CONCLUSIONS

Our findings show that there is a "central core of cervical cancer" protein expression pattern, and suggest that 14-3-3ζ is key to determine if the cell proliferates or dies. In addition, our bioinformatics analysis suggests that the neoplastic phenotype is governed by a non-canonical regulatory pathway.

摘要

背景

宫颈癌是女性群体中的主要致死因素。这种肿瘤是研究癌症维持机制的绝佳模型,因为在大多数情况下,人乳头瘤病毒(HPV)是其病因。为了表征恶性转化对细胞活性的影响,蛋白质组学研究是监测该疾病诱导的生物学改变的可靠方法。在这种背景下,需要一种系统描述来识别不同来源细胞系之间的共同事件,以区分致癌作用的本质。

结果

通过本研究,我们试图从系统角度了解六种宫颈癌细胞系(HPV阳性和阴性)的共同蛋白质组学特征,这些细胞系与非致瘤细胞系HaCaT的特征不同。我们的目标是识别参与癌症维持的共同细胞事件,并建立一个处理蛋白质组学衍生结果的流程。我们通过二维SDS-PAGE和MALDI-TOF质谱分析了六种宫颈癌细胞系的蛋白质提取物,从中鉴定出66种蛋白质的共识集。我们将这组蛋白质称为“宫颈癌核心组”。从这组核心蛋白质出发,我们获得了一个蛋白质-蛋白质相互作用(PPI)网络,通过拓扑分析指出某些蛋白质可能在肿瘤形成过程中发挥核心作用,如14-3-3ζ。转录因子的计算机过表达分析表明,c-Myc、Max和E2F1的过表达是协调肿瘤表型的关键转录因子。

结论

我们的研究结果表明存在“宫颈癌核心组”蛋白质表达模式,并表明14-3-3ζ是决定细胞增殖或死亡的关键。此外,我们的生物信息学分析表明肿瘤表型受非经典调节途径控制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd0f/3152905/7f04cdebb466/1752-0509-5-96-1.jpg

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