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基于 189 种 HPV 型别对乳头瘤病毒（PVs）的分类以及分类学修订建议。

Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments.

机构信息

Department of Molecular Biology and Biochemistry and Program of Public Health, University of California Irvine, Irvine, CA 92697, USA.

出版信息

Virology. 2010 May 25;401(1):70-9. doi: 10.1016/j.virol.2010.02.002. Epub 2010 Mar 5.

DOI:10.1016/j.virol.2010.02.002
PMID:20206957
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3400342/
Abstract

We present an expansion of the classification of the family Papillomaviridae, which now contains 29 genera formed by 189 papillomavirus (PV) types isolated from humans (120 types), non-human mammals, birds and reptiles (64, 3 and 2 types, respectively). To accommodate the number of PV genera exceeding the Greek alphabet, the prefix "dyo" is used, continuing after the Omega-PVs with Dyodelta-PVs. The current set of human PVs is contained within five genera, whereas mammalian, avian and reptile PVs are contained within 20, 3 and 1 genera, respectively. We propose standardizations to the names of a number of animal PVs. As prerequisite for a coherent nomenclature of animal PVs, we propose founding a reference center for animal PVs. We discuss that based on emerging species concepts derived from genome sequences, PV types could be promoted to the taxonomic level of species, but we do not recommend implementing this change at the current time.

摘要

我们提出了一个乳头瘤病毒科（Papillomaviridae）的分类扩展，其中现在包含了 29 个属，由从人类（120 种）、非人类哺乳动物、鸟类和爬行动物中分离出来的 189 种乳头瘤病毒（PV）组成（分别为 64、3 和 2 种）。为了容纳超过希腊字母表的乳头瘤病毒属数量，前缀“dyo”被使用，在 Omega-PVs 之后继续使用 Dyodelta-PVs。目前的人类乳头瘤病毒包含在五个属中，而哺乳动物、鸟类和爬行动物的乳头瘤病毒分别包含在 20、3 和 1 个属中。我们提出了对一些动物乳头瘤病毒名称的标准化建议。作为动物乳头瘤病毒命名一致性的前提，我们建议成立一个动物乳头瘤病毒参考中心。我们讨论了基于从基因组序列中得出的新兴物种概念，乳头瘤病毒类型可以被提升到物种的分类水平，但我们不建议在当前情况下实施这一改变。

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本文引用的文献

[1]
Genomic characterization of a novel human papillomavirus (HPV-117) with a high viral load in a persisting wart.

Virology. 2010-1-22

[2]
Genomic diversity and interspecies host infection of alpha12 Macaca fascicularis papillomaviruses (MfPVs).

Virology. 2009-10-25

[3]
Isolation and genomic characterization of the first Norway rat (Rattus norvegicus) papillomavirus and its phylogenetic position within Pipapillomavirus, primarily infecting rodents.

J Gen Virol. 2009-11

[4]
Identification of a novel human gammapapillomavirus species.

J Gen Virol. 2009-10

[5]
Identification of unusual E6 and E7 proteins within avian papillomaviruses: cellular localization, biophysical characterization, and phylogenetic analysis.

J Virol. 2009-9

[6]
Characterization of seven novel human papillomavirus types isolated from cutaneous tissue, but also present in mucosal lesions.

J Gen Virol. 2009-8

[7]
Macaca fascicularis papillomavirus type 1: a non-human primate betapapillomavirus causing rapidly progressive hand and foot papillomatosis.

J Gen Virol. 2009-4

[8]
Genomic characterization of the first insectivoran papillomavirus reveals an unusually long, second non-coding region and indicates a close relationship to Betapapillomavirus.

J Gen Virol. 2009-3

[9]
Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution.

Science. 2009-4-3

[10]
Sequence and classification of FdPV2, a papillomavirus isolated from feline Bowenoid in situ carcinomas.

Vet Microbiol. 2009-5-28

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