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结核分枝杆菌酰基载体蛋白合成酶呈现出两种不同的pH依赖性结构构象。

Mycobacterium tuberculosis acyl carrier protein synthase adopts two different pH-dependent structural conformations.

作者信息

Gokulan Kuppan, Aggarwal Anup, Shipman Lance, Besra Gurdyal S, Sacchettini James C

机构信息

Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843-3474, USA.

出版信息

Acta Crystallogr D Biol Crystallogr. 2011 Jul;67(Pt 7):657-69. doi: 10.1107/S0907444911020221. Epub 2011 Jun 11.

Abstract

The crystal structures of acyl carrier protein synthase (AcpS) from Mycobacterium tuberculosis (Mtb) and Corynebacterium ammoniagenes determined at pH 5.3 and pH 6.5, respectively, are reported. Comparison of the Mtb apo-AcpS structure with the recently reported structure of the Mtb AcpS-ADP complex revealed that AcpS adopts two different conformations: the orthorhombic and trigonal space-group structures show structural differences in the α2 helix and in the conformation of the α3-α4 connecting loop, which is in a closed conformation. The apo-AcpS structure shows electron density for the entire model and was obtained at lower pH values (4.4-6.0). In contrast, at a higher pH value (6.5) AcpS undergoes significant conformational changes, resulting in disordered regions that show no electron density in the AcpS model. The solved structures also reveal that C. ammoniagenes AcpS undergoes structural rearrangement in two regions, similar to the recently reported Mtb AcpS-ADP complex structure. In vitro reconstitution experiments show that AcpS has a higher post-translational modification activity between pH 4.4 and 6.0 than at pH values above 6.5, where the activity drops owing to the change in conformation. The results show that apo-AcpS and AcpS-ADP adopt different conformations depending upon the pH conditions of the crystallization solution.

摘要

分别报道了结核分枝杆菌(Mtb)和产氨棒杆菌酰基载体蛋白合成酶(AcpS)在pH 5.3和pH 6.5条件下测定的晶体结构。将Mtb脱辅基AcpS结构与最近报道的Mtb AcpS-ADP复合物结构进行比较,发现AcpS呈现两种不同的构象:正交和三角空间群结构在α2螺旋以及α3-α4连接环的构象上存在结构差异,该连接环处于封闭构象。脱辅基AcpS结构显示了整个模型的电子密度,并且是在较低pH值(4.4 - 6.0)下获得的。相比之下,在较高pH值(6.5)时,AcpS发生显著的构象变化,导致在AcpS模型中没有电子密度的无序区域。解析的结构还表明,产氨棒杆菌AcpS在两个区域发生结构重排,类似于最近报道的Mtb AcpS-ADP复合物结构。体外重组实验表明,AcpS在pH 4.4至6.0之间比在pH值高于6.5时具有更高的翻译后修饰活性,在pH值高于6.5时,由于构象变化活性下降。结果表明,脱辅基AcpS和AcpS-ADP根据结晶溶液的pH条件采用不同的构象。

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