Kanaori Kenji, Tajiri Yusuke, Tsuneshige Antonio, Ishigami Izumi, Ogura Takashi, Tajima Kunihiko, Neya Saburo, Yonetani Takashi
Department of Biomolecular Engineering, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto, Japan.
Biochim Biophys Acta. 2011 Oct;1807(10):1253-61. doi: 10.1016/j.bbabio.2011.06.004. Epub 2011 Jun 15.
The cooperative O(2)-binding of hemoglobin (Hb) have been assumed to correlate to change in the quaternary structures of Hb: T(deoxy)- and R(oxy)-quaternary structures, having low and high O(2)-affinities, respectively. Heterotropic allosteric effectors have been shown to interact not only with deoxy- but also oxy-Hbs causing significant reduction in their O(2)-affinities and the modulation of cooperativity. In the presence of two potent effectors, L35 and inositol hexaphosphate (IHP) at pH 6.6, Hb exhibits extremely low O(2)-affinities (K(T)=0.0085mmHg(-1) and K(R)=0.011mmHg(-1)) and thus a very low cooperativity (K(R)/K(T)=1.3 and L(0)=2.4). (1)H-NMR spectra of human adult Hb with these two effectors were examined in order to determine the quaternary state of Hb in solution and to clarify the correlation between the O(2)-affinities and the structural change of Hb caused by the heterotropic effectors. At pH 6.9, (1)H-NMR spectrum of deoxy-Hb in the presence of L35 and IHP showed a marker of the T-quaternary structure (the T-marker) at 14ppm, originated from inter- dimeric α(1)β(2)- (or α(2)β(1)-) hydrogen-bonds, and hyperfine-shifted (hfs) signals around 15-25ppm, caused by high-spin heme-Fe(II)s. Upon addition of O(2), the hfs signals disappeared, reflecting that the heme-Fe(II)s are ligated with O(2), but the T-marker signals still remained, although slightly shifted and broadened, under the partial pressure of O(2) (P(O2)) of 760mmHg. These NMR results accompanying with visible absorption spectroscopy and visible resonance Raman spectroscopy reveal that oxy-Hb in the presence of L35 and IHP below pH 7 takes the ligated T-quaternary structure under the P(O2) of 760mmHg. The L35-concentration dependence of the T-marker in the presence of IHP indicates that there are more than one kind of L35-binding sites in the ligated T-quaternary structure. The stronger binding sites are probably intra-dimeric binding sites between α(1)G- and β(1)G-helices, and the other weaker binding site causes the R→T transition without release of O(2). The fluctuation of the tertiary structure of Hb seems to be caused by both the structural perturbation of α(1)β(1) (or α(2)β(2)) intra-dimeric interface, where the stronger L35-binding sites exist, and by the IHP-binding to the α(1)α(2)- (or β(1)β(2)-) cavity. The tertiary structural fluctuation induced by the allosteric effectors may contribute to the significant reduction of the O(2)-affinity of oxy-Hb, which little depends on the quaternary structures. Therefore, the widely held assumptions of the structure-function correlation of Hb - [the deoxy-state]=[the T-quaternary structure]=[the low O(2)-affinity state] and [the oxy-state]=[the R-quaternary structure]=[the high O(2)-affinity state] and the O(2)-affiny of Hb being regulated by the T/R-quaternary structural transition - are no longer sustainable. This article is part of a Special Issue entitled: Allosteric cooperativity in respiratory proteins.
血红蛋白(Hb)与氧气的协同结合被认为与Hb四级结构的变化相关:T(脱氧)和R(氧合)四级结构,分别具有低和高的氧亲和力。已表明异源别构效应剂不仅与脱氧Hb相互作用,也与氧合Hb相互作用,导致其氧亲和力显著降低并调节协同性。在pH 6.6时,在两种强效效应剂L35和肌醇六磷酸(IHP)存在下,Hb表现出极低的氧亲和力(K(T)=0.0085mmHg⁻¹和K(R)=0.011mmHg⁻¹),因此协同性非常低(K(R)/K(T)=1.3和L(0)=2.4)。研究了含有这两种效应剂的成人Hb的¹H-NMR谱,以确定溶液中Hb的四级状态,并阐明异源效应剂引起的氧亲和力与Hb结构变化之间的相关性。在pH 6.9时,在L35和IHP存在下脱氧Hb的¹H-NMR谱在14ppm处显示出T四级结构的标记(T标记),其源自二聚体间α(1)β(2)-(或α(2)β(1)-)氢键,以及由高自旋血红素-Fe(II)引起的15 - 25ppm附近的超精细位移(hfs)信号。加入氧气后,hfs信号消失,这反映出血红素-Fe(II)与氧气结合,但在760mmHg的氧分压(P(O₂))下,T标记信号仍然存在,尽管略有位移和变宽。这些NMR结果与可见吸收光谱和可见共振拉曼光谱一起表明,在pH 7以下,在L35和IHP存在下的氧合Hb在760mmHg的P(O₂)下采取结合的T四级结构。在IHP存在下T标记的L35浓度依赖性表明,在结合的T四级结构中有不止一种L35结合位点。较强的结合位点可能是α(1)G-和β(1)G-螺旋之间的二聚体内结合位点,另一个较弱的结合位点导致R→T转变而不释放氧气。Hb三级结构的波动似乎是由存在较强L35结合位点的α(1)β(1)(或α(2)β(2))二聚体内界面的结构扰动以及IHP与α(1)α(2)-(或β(1)β(2)-)腔的结合引起的。变构效应剂引起的三级结构波动可能导致氧合Hb的氧亲和力显著降低,而这几乎不依赖于四级结构。因此,关于Hb结构-功能相关性的广泛假设——[脱氧状态]=[T四级结构]=[低氧亲和力状态]和[氧合状态]=[R四级结构]=[高氧亲和力状态]以及Hb的氧亲和力由T/R四级结构转变调节——不再成立。本文是名为:呼吸蛋白中的别构协同性的特刊的一部分。