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一种将大片段突变引入基因特定区域的有效方法。

An efficient method for introducing block mutations into specific regions of a gene.

作者信息

Liu J S, Roesler W J, Hanson R W

机构信息

Case Western Reserve University, School of Medicine.

出版信息

Biotechniques. 1990 Dec;9(6):738-42.

PMID:2176793
Abstract

The introduction by Kunkel of a method which uses uracil-containing single-stranded DNA as a template for site-directed mutagenesis has greatly simplified the procedure for introducing point mutations into DNA in a phagemid vector. We have extended the use of this method to introduce block mutations into specific regions of DNA, using oligonucleotide primers containing multiple nucleotide mismatches which contain new restriction sites. The oligonucleotides, with up to 15 mismatches, can specifically and stably bind to the predicted target sequence. Because of the high mutation rate and convenient selection by restriction enzyme digestion, this method of introducing site-specific block mutations into DNA is very easy and efficient. We have constructed a series of block mutations in the promoter of the gene for the cytosolic form of P-enolpyruvate carboxykinase (GTP) (EC4.1.1.32) (PEPCK) by this method showing that a block mutation in the cAMP responsive element (CRE-1) completely disrupts protein binding to CRE-1 in vitro and causes a dramatic decrease in the basal transcription from the PEPCK promoter in vivo.

摘要

昆克尔提出了一种方法,该方法使用含尿嘧啶的单链DNA作为定点诱变的模板,极大地简化了将点突变引入噬菌粒载体中DNA的程序。我们扩展了这种方法的应用,使用含有多个核苷酸错配且包含新限制酶切位点的寡核苷酸引物,将大片段突变引入DNA的特定区域。这些寡核苷酸最多有15个错配,可以特异性且稳定地与预测的靶序列结合。由于高突变率以及通过限制酶消化进行方便的筛选,这种将位点特异性大片段突变引入DNA的方法非常简便且高效。我们通过这种方法在胞质型磷酸烯醇式丙酮酸羧激酶(GTP)(EC4.1.1.32)(PEPCK)基因的启动子中构建了一系列大片段突变,结果表明,cAMP反应元件(CRE-1)中的大片段突变在体外完全破坏了蛋白质与CRE-1的结合,并在体内导致PEPCK启动子的基础转录显著下降。

相似文献

1
An efficient method for introducing block mutations into specific regions of a gene.一种将大片段突变引入基因特定区域的有效方法。
Biotechniques. 1990 Dec;9(6):738-42.
2
Production of a vector to facilitate DNA mutagenesis and recombination.构建一种用于促进DNA诱变和重组的载体。
Biotechniques. 1994 Apr;16(4):694-701.
3
[Effective method of oligonucleotide-controlled mutagenesis of DNA fragments].[DNA片段的寡核苷酸控制诱变的有效方法]
Bioorg Khim. 1985 May;11(5):621-7.
4
[Functional interrelationship between elements of the Escherichia coli udp gene promotor responsible for binding regulatory proteins CytR, CRP, and RNA polymerase].[负责结合调控蛋白CytR、CRP和RNA聚合酶的大肠杆菌udp基因启动子元件之间的功能相互关系]
Genetika. 2002 Sep;38(9):1223-34.
5
Molecular analysis of the regulation of csiD, a carbon starvation-inducible gene in Escherichia coli that is exclusively dependent on sigma s and requires activation by cAMP-CRP.大肠杆菌中碳饥饿诱导基因csiD调控的分子分析,该基因完全依赖于σS且需要cAMP-CRP激活。
J Mol Biol. 1998 Feb 20;276(2):339-53. doi: 10.1006/jmbi.1997.1533.
6
Phagemid pSIT permits efficient in vitro mutagenesis and tightly controlled expression in E. coli.噬菌粒pSIT允许在体外进行高效诱变,并在大肠杆菌中实现严格控制的表达。
Biotechniques. 1994 Apr;16(4):626-8, 630-3.
7
[Construction and identification of recombinant firefly luciferase reporter plasmid pGL2-PEPCK-Luc].
Zhongguo Yi Xue Ke Xue Yuan Xue Bao. 2004 Oct;26(5):562-5.
8
A protocol for site-directed mutagenesis employing a uracil-containing phagemid template.一种使用含尿嘧啶噬菌粒模板进行定点诱变的方案。
Methods Mol Biol. 1996;58:469-76. doi: 10.1385/0-89603-402-X:469.
9
[A simple way of introducing a transcription initiation signal in vector DNA].
Bioorg Khim. 1991 Jul;17(7):945-52.
10
Uracil-USE, an improved method for site-directed mutagenesis on double-stranded plasmid DNA.尿嘧啶使用法(Uracil-USE),一种用于双链质粒DNA定点诱变的改进方法。
Biotechniques. 1995 Mar;18(3):370-2.

引用本文的文献

1
CREB (cAMP response element binding protein) and C/EBPalpha (CCAAT/enhancer binding protein) are required for the superstimulation of phosphoenolpyruvate carboxykinase gene transcription by adenoviral E1a and cAMP.环磷腺苷效应元件结合蛋白(CREB)和CCAAT增强子结合蛋白α(C/EBPα)是腺病毒E1a和环磷腺苷(cAMP)对磷酸烯醇式丙酮酸羧激酶基因转录进行超刺激所必需的。
Biochem J. 2000 Dec 1;352 Pt 2(Pt 2):335-42.
2
Regulation of phosphoenolpyruvate carboxykinase (GTP) gene transcription.磷酸烯醇式丙酮酸羧激酶(GTP)基因转录的调控
Mol Cell Biochem. 1991;104(1-2):89-100.