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新型产磁铁矿趋磁细菌属于γ-变形菌纲。

Novel magnetite-producing magnetotactic bacteria belonging to the Gammaproteobacteria.

机构信息

School of Life Sciences, University of Nevada at Las Vegas, Las Vegas, NV 89154-4004, USA.

出版信息

ISME J. 2012 Feb;6(2):440-50. doi: 10.1038/ismej.2011.97. Epub 2011 Jul 21.

Abstract

Two novel magnetotactic bacteria (MTB) were isolated from sediment and water collected from the Badwater Basin, Death Valley National Park and southeastern shore of the Salton Sea, respectively, and were designated as strains BW-2 and SS-5, respectively. Both organisms are rod-shaped, biomineralize magnetite, and are motile by means of flagella. The strains grow chemolithoautotrophically oxidizing thiosulfate and sulfide microaerobically as electron donors, with thiosulfate oxidized stoichiometrically to sulfate. They appear to utilize the Calvin-Benson-Bassham cycle for autotrophy based on ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) activity and the presence of partial sequences of RubisCO genes. Strains BW-2 and SS-5 biomineralize chains of octahedral magnetite crystals, although the crystals of SS-5 are elongated. Based on 16S rRNA gene sequences, both strains are phylogenetically affiliated with the Gammaproteobacteria class. Strain SS-5 belongs to the order Chromatiales; the cultured bacterium with the highest 16S rRNA gene sequence identity to SS-5 is Thiohalocapsa marina (93.0%). Strain BW-2 clearly belongs to the Thiotrichales; interestingly, the organism with the highest 16S rRNA gene sequence identity to this strain is Thiohalospira alkaliphila (90.2%), which belongs to the Chromatiales. Each strain represents a new genus. This is the first report of magnetite-producing MTB phylogenetically associated with the Gammaproteobacteria. This finding is important in that it significantly expands the phylogenetic diversity of the MTB. Physiology of these strains is similar to other MTB and continues to demonstrate their potential in nitrogen, iron, carbon and sulfur cycling in natural environments.

摘要

从分别来自死亡谷国家公园 Badwater 盆地的沉积物和水、索尔顿海东南岸采集的样本中分离到了两株新型趋磁细菌(MTB),并分别将其命名为 BW-2 株和 SS-5 株。这两种生物均为杆状,生物矿化磁铁矿,并通过鞭毛运动。这两株菌均为化能自养型,微好氧条件下以硫代硫酸盐和硫化物作为电子供体进行生长,硫代硫酸盐被化学计量氧化为硫酸盐。基于核酮糖-1,5-二磷酸羧化酶/加氧酶(RubisCO)活性和 RubisCO 基因部分序列的存在,它们似乎利用卡尔文-本森-巴斯汉姆循环进行自养。BW-2 株和 SS-5 株均生物矿化八面体磁铁矿晶体链,尽管 SS-5 株的晶体呈拉长状。基于 16S rRNA 基因序列,这两株菌均与γ变形菌纲的细菌同源。SS-5 株属于着色菌目;与 SS-5 具有最高 16S rRNA 基因序列相似性的培养菌是海洋硫还原菌(Thiohalocapsa marina)(93.0%)。BW-2 株显然属于硫杆菌目;有趣的是,与该菌株具有最高 16S rRNA 基因序列相似性的是嗜碱硫还原菌(Thiohalospira alkaliphila)(90.2%),该菌属于着色菌目。每一株菌都代表了一个新的属。这是首次报道与γ变形菌纲相关的具有产磁铁矿能力的 MTB。这一发现非常重要,因为它极大地扩展了 MTB 的系统发育多样性。这些菌株的生理特性与其他 MTB 相似,继续证明了它们在自然环境中氮、铁、碳和硫循环中的潜在应用。

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