Sakuraba Haruhiko, Koga Kohtaroh, Yoneda Kazunari, Kashima Yasuhiro, Ohshima Toshihisa
Department of Applied Biological Science, Faculty of Agriculture, Kagawa University, 2393 Ikenobe, Miki-cho, Kita-gun, Kagawa 761-0795, Japan.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Jul 1;67(Pt 7):753-7. doi: 10.1107/S1744309111018173. Epub 2011 Jun 24.
The crystal structure of an extremely thermostable multicopper oxidase (McoP) from the hyperthermophilic archaeon Pyrobaculum aerophilum was determined at a resolution of 2.0 Å. The overall fold was comprised of three cupredoxin-like domains and the main-chain coordinates of the enzyme were similar to those of multicopper oxidases from Escherichia coli (CueO) and Bacillus subtilis (CotA). However, there were clear topological differences around domain 3 between McoP and the other two enzymes: a methionine-rich helix in CueO and a protruding helix in CotA were not present in McoP. Instead, a large loop (PL-1) covered the T1 copper centre of McoP and a short α-helix in domain 3 extended near the N-terminal end of PL-1. In addition, the sizes of several surface loops in McoP were markedly smaller than the corresponding loops in CueO and CotA. Structural comparison revealed that the presence of extensive hydrophobic interactions and a smaller cavity volume are likely to be the main factors contributing to the hyperthermostability of McoP.
嗜热栖热放线菌中一种极其耐热的多铜氧化酶(McoP)的晶体结构在2.0 Å的分辨率下得以确定。其整体折叠结构由三个类铜蓝蛋白结构域组成,该酶的主链坐标与大肠杆菌(CueO)和枯草芽孢杆菌(CotA)的多铜氧化酶相似。然而,McoP与其他两种酶在结构域3周围存在明显的拓扑差异:CueO中富含甲硫氨酸的螺旋和CotA中突出的螺旋在McoP中不存在。取而代之的是,一个大的环(PL-1)覆盖了McoP的T1铜中心,并且结构域3中的一个短α螺旋在PL-1的N末端附近延伸。此外,McoP中几个表面环的大小明显小于CueO和CotA中的相应环。结构比较表明,广泛的疏水相互作用的存在和较小的腔体积可能是导致McoP具有高热稳定性的主要因素。