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嗜热嗜氧栖热袍菌多铜氧化酶的结构

Structure of a multicopper oxidase from the hyperthermophilic archaeon Pyrobaculum aerophilum.

作者信息

Sakuraba Haruhiko, Koga Kohtaroh, Yoneda Kazunari, Kashima Yasuhiro, Ohshima Toshihisa

机构信息

Department of Applied Biological Science, Faculty of Agriculture, Kagawa University, 2393 Ikenobe, Miki-cho, Kita-gun, Kagawa 761-0795, Japan.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Jul 1;67(Pt 7):753-7. doi: 10.1107/S1744309111018173. Epub 2011 Jun 24.

Abstract

The crystal structure of an extremely thermostable multicopper oxidase (McoP) from the hyperthermophilic archaeon Pyrobaculum aerophilum was determined at a resolution of 2.0 Å. The overall fold was comprised of three cupredoxin-like domains and the main-chain coordinates of the enzyme were similar to those of multicopper oxidases from Escherichia coli (CueO) and Bacillus subtilis (CotA). However, there were clear topological differences around domain 3 between McoP and the other two enzymes: a methionine-rich helix in CueO and a protruding helix in CotA were not present in McoP. Instead, a large loop (PL-1) covered the T1 copper centre of McoP and a short α-helix in domain 3 extended near the N-terminal end of PL-1. In addition, the sizes of several surface loops in McoP were markedly smaller than the corresponding loops in CueO and CotA. Structural comparison revealed that the presence of extensive hydrophobic interactions and a smaller cavity volume are likely to be the main factors contributing to the hyperthermostability of McoP.

摘要

嗜热栖热放线菌中一种极其耐热的多铜氧化酶(McoP)的晶体结构在2.0 Å的分辨率下得以确定。其整体折叠结构由三个类铜蓝蛋白结构域组成,该酶的主链坐标与大肠杆菌(CueO)和枯草芽孢杆菌(CotA)的多铜氧化酶相似。然而,McoP与其他两种酶在结构域3周围存在明显的拓扑差异:CueO中富含甲硫氨酸的螺旋和CotA中突出的螺旋在McoP中不存在。取而代之的是,一个大的环(PL-1)覆盖了McoP的T1铜中心,并且结构域3中的一个短α螺旋在PL-1的N末端附近延伸。此外,McoP中几个表面环的大小明显小于CueO和CotA中的相应环。结构比较表明,广泛的疏水相互作用的存在和较小的腔体积可能是导致McoP具有高热稳定性的主要因素。

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