Uliano Erminia, Chaurasia Ankita, Bernà Luisa, Agnisola Claudio, D'Onofrio Giuseppe
Department of Biological Sciences, University of Naples Federico II, Napoli, Italy.
Mar Genomics. 2010 Mar;3(1):29-34. doi: 10.1016/j.margen.2010.02.001. Epub 2010 Mar 12.
Teleosts are a highly diverse group of animals occupying all kind of aquatic environment. Data on routine mass specific metabolic rate were re-examined correcting them for the Boltzmann's factor. Teleostean fish were grouped in five broad groups, corresponding to major environmental classifications: polar, temperate, sub-tropical, tropical and deep-water. The specific routine metabolic rate, temperature-corrected using the Boltzmann's factor (MR), and the average base composition of genomes (GC%) were calculated in each group. Fish of the polar habitat showed the highest MR. Temperate fish displayed a significantly higher MR than tropical fish, which had the lowest average value. These results were apparently in agreement with the cold adaptation hypothesis. In contrast with this hypothesis, however, the MR of fish living in deep-water environment turned out to be not significantly different from that of fish living in tropical habitats. Most probably, the amount of oxygen dissolved in the water directly affects MR adaptation. Regarding the different habitats, the genomic GC levels showed a decreasing trend similar to that of MR. Indeed, both polar and temperate fish showed a GC level significantly higher than that of both sub-tropical and tropical fish. Plotting the genomic GC levels versus the MR a significant positive correlation was found, supporting the hypothesis that metabolic rate can explain not only the compositional transition mode (e.g. amphibian/mammals), but also the compositional shifting mode (e.g. fish/fish) of evolution observed for vertebrate genomes.
硬骨鱼是占据各种水生环境的高度多样化的动物群体。对常规质量比代谢率的数据进行了重新审视,并根据玻尔兹曼因子对其进行了校正。硬骨鱼被分为五大类,对应于主要的环境分类:极地、温带、亚热带、热带和深水。在每组中计算了使用玻尔兹曼因子进行温度校正的特定常规代谢率(MR)和基因组的平均碱基组成(GC%)。极地栖息地的鱼类显示出最高的MR。温带鱼类的MR明显高于热带鱼类,热带鱼类的MR平均值最低。这些结果显然与冷适应假说一致。然而,与该假说相反的是,生活在深水环境中的鱼类的MR与生活在热带栖息地的鱼类的MR并无显著差异。很可能,水中溶解的氧量直接影响MR适应。关于不同的栖息地,基因组GC水平呈现出与MR相似的下降趋势。事实上,极地和温带鱼类的GC水平均显著高于亚热带和热带鱼类。绘制基因组GC水平与MR的关系图,发现存在显著的正相关,这支持了以下假说:代谢率不仅可以解释进化中观察到的组成转变模式(如两栖动物/哺乳动物),还可以解释脊椎动物基因组的组成变化模式(如鱼类/鱼类)。