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基于粒子的多尺度粗粒化与密度相关势:在分子晶体(六氢-1,3,5-三硝基-s-三嗪)中的应用。

Particle-based multiscale coarse graining with density-dependent potentials: application to molecular crystals (hexahydro-1,3,5-trinitro-s-triazine).

机构信息

U.S. Army Research Laboratory, Aberdeen Proving Ground, Maryland 21005, USA.

出版信息

J Chem Phys. 2011 Jul 28;135(4):044112. doi: 10.1063/1.3607603.

DOI:10.1063/1.3607603
PMID:21806095
Abstract

We describe the development of isotropic particle-based coarse-grain models for crystalline hexahydro-1,3,5-trinitro-s-triazine (RDX). The coarse graining employs the recently proposed multiscale coarse-graining (MS-CG) method, which is a particle-based force-matching approach for deriving free-energy effective interaction potentials. Though one-site and four-site coarse-grain (CG) models were parameterized from atomistic simulations of non-ordered (molten and ambient temperature amorphous) systems, the focus of the paper is a detailed study of the one-site model with a brief recourse to the four-site model. To improve the ability of the one-site model to be applied to crystalline phases at various pressures, it was found necessary to include explicit dependence on a particle density, and a new theory of local density-dependent MS-CG potentials is subsequently presented. The density-dependency is implemented through interpolation of MS-CG force fields derived at a preselected set of reference densities. The computationally economical procedure for obtaining the reference force fields starting from the interaction at ambient density is also described. The one-site MS-CG model adequately describes the atomistic lattice structure of α-RDX at ambient and high pressures, elastic and vibrational properties, pressure-volume curve up to P = 10 GPa, and the melting temperature. In the molten state, the model reproduces the correct pair structure at different pressures as well as higher order correlations. The potential of the MS-CG model is further evaluated in simulations of shocked crystalline RDX.

摘要

我们描述了各向同性基于粒子的粗粒模型的发展用于结晶六氢-1,3,5-三硝基-1,3,5-三嗪(RDX)。粗粒化采用最近提出的多尺度粗粒化(MS-CG)方法,这是一种基于粒子的力匹配方法,用于导出自由能有效相互作用势。尽管一位置和四位置的粗粒化(CG)模型是从无定形(熔融和环境温度非晶)系统的原子模拟中参数化的,但本文的重点是对一位置模型进行详细研究,同时简要介绍四位置模型。为了提高一位置模型在各种压力下应用于结晶相的能力,发现有必要包括对粒子密度的显式依赖,随后提出了一种新的局部密度相关 MS-CG 势能理论。密度依赖性是通过在预选的参考密度集上插值 MS-CG 力场来实现的。还描述了从环境密度下的相互作用开始获得参考力场的计算经济过程。一位置 MS-CG 模型充分描述了α-RDX 在环境和高压下的原子晶格结构、弹性和振动特性、高达 P = 10 GPa 的压力-体积曲线以及熔点。在熔融状态下,该模型在不同压力下再现了正确的对结构以及更高阶的相关性。MS-CG 模型的势在冲击波作用下结晶 RDX 的模拟中进一步得到了评估。

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引用本文的文献

1
Bottom-up Coarse-Graining: Principles and Perspectives.自底向上粗粒化:原理与展望。
J Chem Theory Comput. 2022 Oct 11;18(10):5759-5791. doi: 10.1021/acs.jctc.2c00643. Epub 2022 Sep 7.