• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

鉴定单克隆抗体中两个不同位置天冬氨酸残基的异构化产物。

Characterization of the isomerization products of aspartate residues at two different sites in a monoclonal antibody.

机构信息

Late Stage Pharmaceutical Development, Genentech, Inc., 1 DNA Way, South San Francisco, California 94080, USA.

出版信息

Pharm Res. 2012 Jan;29(1):187-97. doi: 10.1007/s11095-011-0534-2. Epub 2011 Aug 2.

DOI:10.1007/s11095-011-0534-2
PMID:21809161
Abstract

PURPOSE

To identify and understand isomerization products and degradation profile of different aspartate residues in an IgG1 monoclonal antibody.

METHODS

Recombinant IgG1 was incubated for extended periods of time in a formulation buffer at recommended and accelerated storage temperatures. Isomerization reaction products were analyzed using ion exchange chromatography (IEC), hydrophobic interaction chromatography (HIC), peptide mapping, and LC-MS. Model peptides with sequences containing specific aspartate residues in IgG1 were synthesized and incubated under accelerated conditions. Products of isomerization reactions of peptides were analyzed by reverse phase chromatography (RP-HPLC) and LC-MS. X-ray crystallography data from Fab of IgG1 were used to understand mechanism of isomerization reactions.

RESULTS

A MAb containing labile Asp32-Gly sequence in CDR I region undergoes rapid isomerization reaction and leads to formation of isoaspartate (IsoAsp) and cyclic imide (Asu) forms. Isomerization of aspartate residues was observed in a non-CDR region containing Asp74-Ser sequence. Isomerization reaction at Asp74-Ser led to formation of Asu74 and trace isoAsp74. While isoAsp32 increased linearly with time, isoAsp74 did not increase during storage. Asu32 and Asu74 followed non-linear degradation kinetics and reached steady state over time. Isomerization reaction of two different model peptides containing Asp32-Gly or Asp74-Ser with neighboring amino acid sequences as those found in the MAb result in formation of IsoAsp.

CONCLUSIONS

Observed levels of Asu and trace IsoAsp at the Asp74 site are unusual for typical isomerization reactions. In addition to primary sequences, pKa, solvent exposure and high order structure around aspartate residues may have influenced isomerization reaction at Asp74 in MAbI. Different degradation profiles from the two Asp residues can influence shelf life and should be carefully evaluated during product development.

摘要

目的

鉴定和了解 IgG1 单克隆抗体中不同天冬氨酸残基的异构化产物和降解情况。

方法

在推荐的加速储存温度下,将重组 IgG1 在制剂缓冲液中孵育较长时间。使用离子交换色谱(IEC)、疏水相互作用色谱(HIC)、肽图和 LC-MS 分析异构化反应产物。合成含有 IgG1 中天冬氨酸残基特定序列的模型肽,并在加速条件下孵育。通过反相色谱(RP-HPLC)和 LC-MS 分析肽的异构化反应产物。使用 IgG1 Fab 的 X 射线晶体学数据来了解异构化反应的机制。

结果

含有 CDR I 区不稳定 Asp32-Gly 序列的 MAb 会发生快速异构化反应,导致形成异天冬氨酸(IsoAsp)和环亚氨酸(Asu)形式。在含有 Asp74-Ser 序列的非 CDR 区观察到天冬氨酸残基的异构化。Asp74-Ser 的异构化反应导致 Asu74 和痕量 isoAsp74 的形成。虽然 isoAsp32 随时间呈线性增加,但在储存过程中 isoAsp74 没有增加。Asu32 和 Asu74 遵循非线性降解动力学,随时间达到稳定状态。含有 Asp32-Gly 或 Asp74-Ser 与 MAb 中发现的相邻氨基酸序列的两种不同模型肽的异构化反应导致 IsoAsp 的形成。

结论

在典型的异构化反应中,观察到 Asp74 位点的 Asu 和痕量 IsoAsp 水平异常。除了一级序列外,pKa、溶剂暴露和天冬氨酸残基周围的高级结构也可能影响 MAbI 中天冬氨酸的异构化反应。两个天冬氨酸残基的不同降解谱可能会影响货架期,在产品开发过程中应仔细评估。

相似文献

1
Characterization of the isomerization products of aspartate residues at two different sites in a monoclonal antibody.鉴定单克隆抗体中两个不同位置天冬氨酸残基的异构化产物。
Pharm Res. 2012 Jan;29(1):187-97. doi: 10.1007/s11095-011-0534-2. Epub 2011 Aug 2.
2
Aspartate isomerization in the complementarity-determining regions of two closely related monoclonal antibodies.两种密切相关单克隆抗体互补决定区中的天冬氨酸异构化
Biochemistry. 2007 Feb 13;46(6):1534-44. doi: 10.1021/bi061500t. Epub 2007 Jan 17.
3
Structure-Function Assessment and High-Throughput Quantification of Site-Specific Aspartate Isomerization in Monoclonal Antibody Using a Novel Analytical Tool Kit.使用新型分析工具包评估结构-功能并高通量定量单克隆抗体中特异性天冬氨酸异构化。
J Pharm Sci. 2020 Jan;109(1):422-428. doi: 10.1016/j.xphs.2019.08.018. Epub 2019 Aug 27.
4
Identification and measurement of isoaspartic acid formation in the complementarity determining region of a fully human monoclonal antibody.全人源单克隆抗体互补决定区中异天冬氨酸形成的鉴定与测量
J Chromatogr B Analyt Technol Biomed Life Sci. 2009 Nov 15;877(30):3841-9. doi: 10.1016/j.jchromb.2009.09.031. Epub 2009 Sep 25.
5
Unequivocal Identification of Aspartic Acid and Aspartic Acid by MALDI-TOF/TOF: From Peptide Standards to a Therapeutic Antibody.基质辅助激光解吸电离飞行时间/飞行时间质谱法对天冬氨酸和天冬氨酸的明确鉴定:从肽标准品到治疗性抗体。
J Am Soc Mass Spectrom. 2021 Aug 4;32(8):1901-1909. doi: 10.1021/jasms.0c00370. Epub 2021 Jan 3.
6
Simultaneous assessment of Asp isomerization and Asn deamidation in recombinant antibodies by LC-MS following incubation at elevated temperatures.通过在高温孵育后 LC-MS 对重组抗体中的 Asp 异构化和 Asn 脱酰胺进行同时评估。
PLoS One. 2012;7(1):e30295. doi: 10.1371/journal.pone.0030295. Epub 2012 Jan 17.
7
Identification and characterization of monoclonal antibody fragments cleaved at the complementarity determining region using orthogonal analytical methods.使用正交分析方法鉴定和表征在互补决定区裂解的单克隆抗体片段。
J Chromatogr B Analyt Technol Biomed Life Sci. 2017 Mar 24;1048:121-129. doi: 10.1016/j.jchromb.2017.02.019. Epub 2017 Feb 21.
8
Ion-pair reversed-phase high performance liquid chromatography method for the quantification of isoaspartic acid in a monoclonal antibody.离子对反相高效液相色谱法测定单克隆抗体中异天冬氨酸的含量。
J Chromatogr B Analyt Technol Biomed Life Sci. 2014 Apr 1;955-956:26-33. doi: 10.1016/j.jchromb.2014.02.017. Epub 2014 Feb 18.
9
Elucidation of degradants in acidic peak of cation exchange chromatography in an IgG1 monoclonal antibody formed on long-term storage in a liquid formulation.阐明在长期储存于液体制剂中的 IgG1 单克隆抗体的阳离子交换色谱酸性峰中的降解产物。
Pharm Res. 2012 Jan;29(1):209-24. doi: 10.1007/s11095-011-0536-0. Epub 2011 Aug 16.
10
Qualification of a Quantitative Method for Monitoring Aspartate Isomerization of a Monoclonal Antibody by Focused Peptide Mapping.通过聚焦肽图分析监测单克隆抗体天冬氨酸异构化定量方法的验证
PDA J Pharm Sci Technol. 2016;70(6):490-507. doi: 10.5731/pdajpst.2015.006239. Epub 2016 Apr 18.

引用本文的文献

1
Determination of Trends Underlying Aspartic Acid Isomerization in Intact Proteins Reveals Unusually Rapid Isomerization of Tau.完整蛋白质中天冬氨酸异构化潜在趋势的测定揭示了Tau蛋白异常快速的异构化。
ACS Chem Neurosci. 2025 Feb 19;16(4):673-686. doi: 10.1021/acschemneuro.4c00721. Epub 2025 Jan 29.
2
Unusually Rapid Isomerization of Aspartic Acid in Tau.微管相关蛋白Tau中天冬氨酸异常快速的异构化
bioRxiv. 2024 Dec 5:2024.12.04.626870. doi: 10.1101/2024.12.04.626870.
3
Predicting deamidation and isomerization sites in therapeutic antibodies using structure-based approaches.

本文引用的文献

1
Kinetics of chemical degradation in monoclonal antibodies: relationship between rates at the molecular and peptide levels.单克隆抗体的化学降解动力学:分子水平和肽水平的速率关系。
Anal Chem. 2010 Apr 15;82(8):3198-206. doi: 10.1021/ac902752e.
2
Effect of protein structure on deamidation rate in the Fc fragment of an IgG1 monoclonal antibody.蛋白质结构对IgG1单克隆抗体Fc片段脱酰胺化速率的影响
Protein Sci. 2009 Aug;18(8):1573-84. doi: 10.1002/pro.173.
3
Heterogeneity of monoclonal antibodies revealed by charge-sensitive methods.电荷敏感方法揭示的单克隆抗体的异质性
基于结构的方法预测治疗性抗体中的脱酰胺和异构化位点。
MAbs. 2024 Jan-Dec;16(1):2333436. doi: 10.1080/19420862.2024.2333436. Epub 2024 Mar 28.
4
Combination of On-Line and Off-Line Two-Dimensional Liquid Chromatography-Mass Spectrometry for Comprehensive Characterization of mAb Charge Variants and Precise Instructions for Rapid Process Development.在线和离线二维液相色谱-质谱联用技术全面表征单抗电荷变异体及快速工艺开发的精准操作指南
Int J Mol Sci. 2023 Oct 14;24(20):15184. doi: 10.3390/ijms242015184.
5
Identification and characterization of an unexpected isomerization motif in CDRH2 that affects antibody activity.鉴定和表征 CDRH2 中一个意想不到的异构化模体,该模体影响抗体活性。
MAbs. 2023 Jan-Dec;15(1):2215364. doi: 10.1080/19420862.2023.2215364.
6
Developability assessment at early-stage discovery to enable development of antibody-derived therapeutics.在早期发现阶段进行可开发性评估,以推动抗体衍生疗法的开发。
Antib Ther. 2022 Nov 11;6(1):13-29. doi: 10.1093/abt/tbac029. eCollection 2023 Jan.
7
Risk-Based Control Strategies of Recombinant Monoclonal Antibody Charge Variants.重组单克隆抗体电荷变体的基于风险的控制策略
Antibodies (Basel). 2022 Nov 20;11(4):73. doi: 10.3390/antib11040073.
8
Deciphering deamidation and isomerization in therapeutic proteins: Effect of neighboring residue.解析治疗性蛋白质中的脱酰胺和异构化:邻近残基的影响。
MAbs. 2022 Jan-Dec;14(1):2143006. doi: 10.1080/19420862.2022.2143006.
9
In silico prediction of post-translational modifications in therapeutic antibodies.治疗性抗体中翻译后修饰的计算预测。
MAbs. 2022 Jan-Dec;14(1):2023938. doi: 10.1080/19420862.2021.2023938.
10
Metal Ion Interactions with mAbs: Part 2. Zinc-Mediated Aggregation of IgG1 Monoclonal Antibodies.金属离子与单抗的相互作用:第 2 部分。锌介导的 IgG1 单克隆抗体聚集。
Pharm Res. 2021 Aug;38(8):1387-1395. doi: 10.1007/s11095-021-03089-7. Epub 2021 Aug 11.
Curr Pharm Biotechnol. 2008 Dec;9(6):468-81. doi: 10.2174/138920108786786402.
4
Structural investigation of a phosphorylation-catalyzed, isoaspartate-free, protein succinimide: crystallographic structure of post-succinimide His15Asp histidine-containing protein.磷酸化催化的、无异天冬氨酸的蛋白质琥珀酰亚胺的结构研究:琥珀酰亚胺化后含组氨酸的His15Asp蛋白的晶体结构
Biochemistry. 2008 Sep 9;47(36):9486-96. doi: 10.1021/bi800847a. Epub 2008 Aug 15.
5
Very fast prediction and rationalization of pKa values for protein-ligand complexes.蛋白质-配体复合物pKa值的快速预测与合理化分析
Proteins. 2008 Nov 15;73(3):765-83. doi: 10.1002/prot.22102.
6
Identification and quantification of degradations in the Asp-Asp motifs of a recombinant monoclonal antibody.重组单克隆抗体中天冬氨酸-天冬氨酸基序降解的鉴定与定量分析。
J Pharm Biomed Anal. 2008 May 12;47(1):23-30. doi: 10.1016/j.jpba.2007.11.050. Epub 2007 Dec 14.
7
Identification of deamidation and isomerization sites on pharmaceutical recombinant antibody using H(2)(18)O.利用H₂¹⁸O鉴定药用重组抗体上的脱酰胺化和异构化位点。
Anal Biochem. 2007 Sep 1;368(1):49-60. doi: 10.1016/j.ab.2007.05.012. Epub 2007 May 17.
8
Accumulation of succinimide in a recombinant monoclonal antibody in mildly acidic buffers under elevated temperatures.在高温下的微酸性缓冲液中,重组单克隆抗体中琥珀酰亚胺的积累。
Pharm Res. 2007 Jun;24(6):1145-56. doi: 10.1007/s11095-007-9241-4. Epub 2007 Mar 24.
9
18O labeling method for identification and quantification of succinimide in proteins.用于鉴定和定量蛋白质中琥珀酰亚胺的18O标记方法。
Anal Chem. 2007 Apr 1;79(7):2714-21. doi: 10.1021/ac0617870. Epub 2007 Feb 22.
10
Aspartate isomerization in the complementarity-determining regions of two closely related monoclonal antibodies.两种密切相关单克隆抗体互补决定区中的天冬氨酸异构化
Biochemistry. 2007 Feb 13;46(6):1534-44. doi: 10.1021/bi061500t. Epub 2007 Jan 17.