Key Laboratory of Agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education, Huazhong Agricultural University, Wuhan, Hubei 430070, PR China.
Genet Sel Evol. 2011 Aug 5;43(1):29. doi: 10.1186/1297-9686-43-29.
The very low density lipoprotein receptor gene (VLDLR), a member of the low density lipoprotein receptor (LDLR) gene family, plays a crucial role in the synthesis of yolk protein precursors in oviparous species. Differential splicing of this gene has been reported in human, rabbit and rat. In chicken, studies showed that the VLDLR protein on the oocyte surface mediates the uptake of yolk protein precursors into growing oocytes. However, information on the VLDLR gene in duck is still scarce.
Full-length duck VLDLR cDNA was obtained by comparative cloning and rapid amplification of cDNA ends (RACE). Tissue expression patterns were analysed by semi-quantitative reverse-transcription polymerase chain reaction (RT-PCR). Association between the different genotypes and egg performance traits was investigated with the general linear model (GLM) procedure of the SAS® software package.
In duck, two VLDLR transcripts were identified, one transcript (variant-a) containing an O-linked sugar domain and the other (variant-b) not containing this sugar domain. These transcripts share ~70 to 90% identity with their counterparts in other species. A phylogenetic tree based on amino acid sequences showed that duck VLDLR proteins were closely related with those of chicken and zebra finch. The two duck VLDLR transcripts are differentially expressed i.e. VLDLR-a is mainly expressed in muscle tissue and VLDLR-b in reproductive organs. We have localized the duck VLDLR gene on chromosome Z. An association analysis using two completely linked SNP sites (T/C at position 2025 bp of the ORF and G/A in intron 13) and records from two generations demonstrated that the duck VLDLR gene was significantly associated with egg production (P < 0.01), age of first egg (P < 0.01) and body weight of first egg (P < 0.05).
Duck and chicken VLDLR genes probably perform similar function in the development of growing oocytes and deposition of yolk lipoprotein. Therefore, VLDLR could be a candidate gene for duck egg performance and be used as a genetic marker to improve egg performance in ducks.
极低密度脂蛋白受体基因(VLDLR)是低密度脂蛋白受体(LDLR)基因家族的成员,在卵生动物的卵黄蛋白前体合成中发挥着关键作用。该基因在人类、兔子和老鼠中已经报道存在差异剪接。在鸡中,研究表明卵母细胞表面的 VLDLR 蛋白介导卵黄蛋白前体进入生长卵母细胞的摄取。然而,鸭的 VLDLR 基因信息仍然匮乏。
通过比较克隆和快速扩增 cDNA 末端(RACE)获得全长鸭 VLDLR cDNA。通过半定量逆转录聚合酶链反应(RT-PCR)分析组织表达模式。使用 SAS®软件包的一般线性模型(GLM)程序研究不同基因型与蛋性能性状的关联。
在鸭中,鉴定出两种 VLDLR 转录本,一种转录本(变体-a)含有 O-连接糖结构域,另一种(变体-b)不含此糖结构域。这些转录本与其他物种的对应物具有约 70%至 90%的同一性。基于氨基酸序列的系统发育树表明,鸭 VLDLR 蛋白与鸡和斑马雀的蛋白密切相关。两种鸭 VLDLR 转录本的表达存在差异,即 VLDLR-a 主要在肌肉组织中表达,而 VLDLR-b 在生殖器官中表达。我们已经将鸭 VLDLR 基因定位在染色体 Z 上。使用两个完全连锁的 SNP 位点(ORF 位置 2025 位的 T/C 和内含子 13 中的 G/A)以及两个世代的记录进行的关联分析表明,鸭 VLDLR 基因与产蛋数(P<0.01)、第一枚蛋的产蛋日龄(P<0.01)和第一枚蛋的体重(P<0.05)显著相关。
鸭和鸡的 VLDLR 基因在生长卵母细胞的发育和卵黄脂蛋白的沉积中可能具有相似的功能。因此,VLDLR 可能是鸭蛋性能的候选基因,并可作为提高鸭蛋性能的遗传标记。