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谷氨酸棒杆菌新型草酰乙酸脱羧酶Cg1458的表达、纯化、结晶及初步晶体学分析

Expression, purification, crystallization and preliminary crystallographic analysis of Cg1458: a novel oxaloacetate decarboxylase from Corynebacterium glutamicum.

作者信息

Ran Tingting, Wang Yu, Xu Dongqing, Wang Weiwu

机构信息

Key Laboratory of Microbiological Engineering of Agricultural Environment, Ministry of Agriculture, College of Life Sciences, Nanjing Agricultural University, Nanjing, People's Republic of China.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Aug 1;67(Pt 8):968-70. doi: 10.1107/S1744309111023220. Epub 2011 Jul 27.

Abstract

Oxaloacetate decarboxylase catalyses the decarboxylation of oxaloacetate to pyruvate and CO(2). Recently, the Corynebacterium glutamicum gene product Cg1458 was determined to be a soluble oxaloacetate decarboxylase. To elucidate the mechanism of oxaloacetate decarboxylation by Cg1458, recombinant Cg1458 was purified and crystallized. The best crystal was grown from 0.2 M MgCl(2), 0.1 M Bis-Tris pH 6.0, 25%(w/v) polyethylene glycol 3350 using the hanging-drop method. The crystals belonged to space group P4(3)2(1)2, with unit-cell parameters a = b = 124.1, c = 73.6 Å. The crystals are most likely to contain a dimer in the asymmetric unit, with a V(M) value of 2.27 Å(3) Da(-1). A full data set was collected at 1.9 Å resolution using synchrotron radiation on beamline BL17U of SSRF, Shanghai, China. Structure-solution attempts by molecular replacement were successful with PDB entries 3qdf or 2dfu as the template.

摘要

草酰乙酸脱羧酶催化草酰乙酸脱羧生成丙酮酸和二氧化碳。最近,已确定谷氨酸棒杆菌基因产物Cg1458是一种可溶性草酰乙酸脱羧酶。为阐明Cg1458催化草酰乙酸脱羧的机制,对重组Cg1458进行了纯化和结晶。使用悬滴法,在0.2 M MgCl₂、0.1 M Bis-Tris pH 6.0、25%(w/v)聚乙二醇3350中生长出最佳晶体。这些晶体属于空间群P4₃2₁2,晶胞参数a = b = 124.1,c = 73.6 Å。晶体的不对称单元中很可能包含一个二聚体,V(M)值为2.27 ų Da⁻¹。使用中国上海SSRF的BL17U光束线的同步辐射,在1.9 Å分辨率下收集了完整数据集。以PDB条目3qdf或2dfu为模板,通过分子置换进行结构解析的尝试获得成功。

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