Kohno T, Kohda D, Haruki M, Yokoyama S, Miyazawa T
Department of Biophysics and Biochemistry, Faculty of Science, University of Tokyo, Japan.
J Biol Chem. 1990 Apr 25;265(12):6931-5.
Nonprotein amino acid furanomycin was found to bind with Escherichia coli isoleucyl-tRNA synthetase (IleRS) almost as tightly as the substrate L-isoleucine. The conformation of furanomycin bound to the enzyme was determined by NMR analyses including the transferred nuclear Overhauser effect method. The conformation of IleRS-bound furanomycin was similar to that of L-isoleucine, although the chemical structure of furanomycin is unlike that of L-isoleucine. By E. coli IleRS, E. coli tRNAIle was charged with furanomycin as efficiently as with L-isoleucine. Furthermore, furanomycyl-tRNAIle was bound to polypeptide chain elongation factor Tu as tightly as isoleucyl-tRNAIle. Furanomycin was found to be incorporated into beta-lactamase precursor by in vitro protein biosynthesis. A newly designed amino acid will probably be incorporated into proteins, provided that the new amino acid takes a similar conformation as a protein-constituting amino acid in the active site of an aminoacyl-tRNA synthetase.
发现非蛋白质氨基酸呋喃霉素与大肠杆菌异亮氨酰 - tRNA合成酶(IleRS)的结合紧密程度几乎与底物L - 异亮氨酸相同。通过包括转移核Overhauser效应方法在内的核磁共振分析确定了与该酶结合的呋喃霉素的构象。与IleRS结合的呋喃霉素的构象与L - 异亮氨酸的构象相似,尽管呋喃霉素的化学结构与L - 异亮氨酸不同。通过大肠杆菌IleRS,大肠杆菌tRNAIle用呋喃霉素进行氨酰化的效率与用L - 异亮氨酸时一样高。此外,呋喃霉素基 - tRNAIle与多肽链延伸因子Tu的结合紧密程度与异亮氨酰 - tRNAIle相同。通过体外蛋白质生物合成发现呋喃霉素被掺入β - 内酰胺酶前体中。如果新设计的氨基酸在氨酰 - tRNA合成酶的活性位点中采取与构成蛋白质的氨基酸相似的构象,那么它很可能会被掺入蛋白质中。