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固氮酶反应产物的测定

Assays of nitrogenase reaction products.

作者信息

Newton William E, Dilworth Michael J

机构信息

Department of Biochemistry, Virginia Polytechnic Institute & State University, Blacksburg, VA 24061, USA.

出版信息

Methods Mol Biol. 2011;766:105-27. doi: 10.1007/978-1-61779-194-9_8.

DOI:10.1007/978-1-61779-194-9_8
PMID:21833864
Abstract

Steady-state assays of nitrogenases share at least five requirements: an anaerobic environment, a consistent source of magnesium adenosine triphosphate (MgATP), a suitable source of reductant, a buffer system compatible with the product-quantification protocol to be used, and the desired substrate. The assay is initiated by injection of the component protein(s) of the enzyme or MgATP and terminated by injection of either acid or a solution of Na(2)EDTA. The various nitrogenases catalyze the reduction of a wide variety of substrates. This chapter outlines the methods used to analyze the products of nitrogenase-catalyzed reactions involving nitrogen-nitrogen bonds, nitrogen-oxygen bonds, carbon-nitrogen bonds, carbon-carbon bonds, carbon-oxygen bonds, carbon-sulfur bonds, and hydrogen only. The usefulness of measurements of residual amounts of other components of nitrogenase assays is also discussed.

摘要

固氮酶的稳态分析至少有五个要求

厌氧环境、三磷酸镁腺苷(MgATP)的稳定来源、合适的还原剂来源、与要使用的产物定量方案兼容的缓冲系统以及所需的底物。分析通过注入酶的组分蛋白或MgATP开始,并通过注入酸或Na₂EDTA溶液终止。各种固氮酶催化多种底物的还原反应。本章概述了用于分析固氮酶催化反应产物的方法,这些反应涉及氮-氮键、氮-氧键、碳-氮键、碳-碳键、碳-氧键、碳-硫键以及仅涉及氢的反应。还讨论了测定固氮酶分析中其他组分残留量的用途。

相似文献

1
Assays of nitrogenase reaction products.固氮酶反应产物的测定
Methods Mol Biol. 2011;766:105-27. doi: 10.1007/978-1-61779-194-9_8.
2
Electron transfer in nitrogenase analyzed by Marcus theory: evidence for gating by MgATP.用马库斯理论分析固氮酶中的电子转移:MgATP门控的证据。
Biochemistry. 1998 Jan 6;37(1):399-407. doi: 10.1021/bi971681m.
3
Evidence for electron transfer from the nitrogenase iron protein to the molybdenum-iron protein without MgATP hydrolysis: characterization of a tight protein-protein complex.在不水解MgATP的情况下,固氮酶铁蛋白向钼铁蛋白进行电子转移的证据:一种紧密蛋白质-蛋白质复合物的特性
Biochemistry. 1996 Jun 4;35(22):7188-96. doi: 10.1021/bi9603985.
4
Reductant-independent ATP hydrolysis catalyzed by homologous nitrogenase proteins from Azotobacter vinelandii and heterologous crosses with Clostridium pasteuranium.由棕色固氮菌的同源固氮酶蛋白催化的不依赖还原剂的ATP水解以及与巴氏梭菌的异源杂交。
Arch Biochem Biophys. 1995 Nov 10;323(2):215-22. doi: 10.1006/abbi.1995.9972.
5
Effects on substrate reduction of substitution of histidine-195 by glutamine in the alpha-subunit of the MoFe protein of Azotobacter vinelandii nitrogenase.用谷氨酰胺取代维涅兰德固氮菌固氮酶钼铁蛋白α亚基中的组氨酸-195对底物还原的影响。
Biochemistry. 1998 Dec 15;37(50):17495-505. doi: 10.1021/bi9812017.
6
Electron transfer from the nitrogenase iron protein to the [8Fe-(7/8)S] clusters of the molybdenum-iron protein.电子从固氮酶铁蛋白转移至钼铁蛋白的[8Fe-(7/8)S]簇。
Biochemistry. 1996 Dec 24;35(51):16770-6. doi: 10.1021/bi962286j.
7
Elucidation of a MgATP signal transduction pathway in the nitrogenase iron protein: formation of a conformation resembling the MgATP-bound state by protein engineering.固氮酶铁蛋白中MgATP信号转导途径的阐明:通过蛋白质工程形成类似于MgATP结合状态的构象。
Biochemistry. 1996 Apr 16;35(15):4766-75. doi: 10.1021/bi960026w.
8
A model of nitrogenase active-centre and mechanism of nitrogenase catalysis.固氮酶活性中心模型及固氮酶催化机制
Sci Sin. 1976 Jul-Aug;19(4):460-74.
9
The vanadium-containing nitrogenase of Azotobacter.固氮菌的含钒固氮酶。
Biofactors. 1988 Jul;1(2):111-6.
10
The [4Fe-4S] cluster domain of the nitrogenase iron protein facilitates conformational changes required for the cooperative binding of two nucleotides.固氮酶铁蛋白的[4Fe-4S]簇结构域促进了两个核苷酸协同结合所需的构象变化。
Biochemistry. 1996 Dec 10;35(49):15654-62. doi: 10.1021/bi961886f.

引用本文的文献

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Reduction of Substrates by Nitrogenases.固氮酶还原底物。
Chem Rev. 2020 Jun 24;120(12):5082-5106. doi: 10.1021/acs.chemrev.9b00556. Epub 2020 Mar 16.
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Determination of nucleoside triphosphatase activities from measurement of true inorganic phosphate in the presence of labile phosphate compounds.在存在不稳定磷酸盐化合物的情况下,通过测定真实无机磷酸盐来确定核苷三磷酸酶活性。
Anal Biochem. 2017 Mar 1;520:62-67. doi: 10.1016/j.ab.2016.12.012. Epub 2016 Dec 23.
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Nitrogenase reduction of carbon-containing compounds.含碳化合物的固氮酶还原作用。
Biochim Biophys Acta. 2013 Aug-Sep;1827(8-9):1102-11. doi: 10.1016/j.bbabio.2013.04.003. Epub 2013 Apr 16.