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蜚蠊实时荧光定量聚合酶链反应内参基因的鉴定与验证

Identification and validation of reference genes for quantitative real-time polymerase chain reaction in Cimex lectularius.

机构信息

Department of Entomology, Ohio Agricultural and Research Development Center, The Ohio State University, Wooster, OH 44691, USA.

出版信息

J Med Entomol. 2011 Jul;48(4):947-51. doi: 10.1603/me10262.

Abstract

Quantitative real-time polymerase chain reaction (qRT-PCR) has emerged as robust methodology for gene expression studies, but reference genes are crucial for accurate normalization. Commonly used reference genes are housekeeping genes that are thought to be nonregulated; however, their expression can be unstable across different experimental conditions. We report the identification and validation of suitable reference genes in the bed bug, Cimex lectularius, by using qRT-PCR. The expression stability of eight reference genes in different tissues (abdominal cuticle, midgut, Malpighian tubules, and ovary) and developmental stages (early instar nymphs, late instar nymphs, and adults) of pesticide-susceptible and pesticide-exposed C. lectularius were analyzed using geNorm, NormFinder, and BestKeeper. Overall expression analysis of the eight reference genes revealed significant variation among samples, indicating the necessity of validating suitable reference genes for accurate quantification of mRNA transcripts. Ribosomal protein (RPL18) exhibited the most stable gene expression across all the tissue and developmental-stage samples; a-tubulin revealed the least stability across all of the samples examined. Thus, we recommend RPL18 as a suitable reference gene for normalization in gene expression studies of C. lectularius.

摘要

实时荧光定量聚合酶链反应(qRT-PCR)已成为研究基因表达的强大方法,但参考基因对于准确的归一化至关重要。常用的参考基因是被认为不受调控的管家基因;然而,它们的表达在不同的实验条件下可能不稳定。我们通过 qRT-PCR 报告了在臭虫(Cimex lectularius)中合适的参考基因的鉴定和验证。使用 geNorm、NormFinder 和 BestKeeper 分析了在对杀虫剂敏感和暴露的 C. lectularius 的不同组织(腹部表皮、中肠、马氏管和卵巢)和发育阶段(早期若虫、晚期若虫和成虫)中 8 个参考基因的表达稳定性。对 8 个参考基因的整体表达分析表明,样品之间存在显著差异,表明需要验证合适的参考基因,以准确定量 mRNA 转录本。核糖体蛋白(RPL18)在所有组织和发育阶段的样品中表现出最稳定的基因表达;在所有检查的样品中,a-微管蛋白的稳定性最差。因此,我们建议 RPL18 作为 C. lectularius 基因表达研究中归一化的合适参考基因。

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