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开发一种与硅藻细胞相互作用的 Marineobacter adhaerens HP15 海洋聚集体形成的遗传系统。

Development of a genetic system for Marinobacter adhaerens HP15 involved in marine aggregate formation by interacting with diatom cells.

机构信息

Jacobs University Bremen, School of Engineering and Science, 28759 Bremen, Germany.

出版信息

J Microbiol Methods. 2011 Nov;87(2):176-83. doi: 10.1016/j.mimet.2011.08.008. Epub 2011 Aug 22.

Abstract

Diatom aggregation is substantial for organic carbon flux from the photic zone to deeper waters. Many heterotrophic bacteria ubiquitously found in diverse marine environments interact with marine algae and thus impact organic matter and energy cycling in the ocean. In particular, Marinobacter adhaerens HP15 induces aggregate formation while interacting with the diatom, Thalassiosira weissflogii. To study this effect at the molecular level, a genetic tool system was developed for strain HP15. The antibiotic susceptibility spectrum of this organism was determined and electroporation and conjugation protocols were established. Among various plasmids of different incompatibility groups, only two were shown to replicate in M. adhaerens. 1.4×10(-3) transconjugants per recipient were obtained for a broad-host-range vector. Electroporation efficiency corresponded to 1.1×10(5)CFU per μg of DNA. Transposon and gene-specific mutageneses were conducted for flagellum biosynthetic genes. Mutant phenotypes were confirmed by swimming assay and microscopy. Successful expression of two reporter genes in strain HP15 revealed useful tools for gene expression analyses, which will allow studying diverse bacteria-algae interactions at the molecular level and hence to gain a mechanistic understanding of micro-scale processes underlying ocean basin-scale processes. This study is the first report for the genetic manipulation of a Marinobacter species which specifically interacts with marine diatoms and serves as model to additionally analyze various previously reported Marinobacter-algae interactions in depth.

摘要

硅藻聚集对于从光区到更深水域的有机碳通量很重要。许多在各种海洋环境中普遍存在的异养细菌与海洋藻类相互作用,从而影响海洋中的有机物和能量循环。特别是, Marineobacter adhaerens HP15 在与硅藻 Thalassiosira weissflogii 相互作用时会诱导聚集体形成。为了在分子水平上研究这种效应,开发了用于菌株 HP15 的遗传工具系统。确定了该生物体的抗生素敏感性谱,并建立了电穿孔和接合方案。在不同不相容性群的各种质粒中,只有两种被证明可以在 Marineobacter adhaerens 中复制。对于广谱载体,每个受体获得 1.4×10(-3)个转导子。电穿孔效率相当于每μg DNA 有 1.1×10(5)CFU。进行了鞭毛生物合成基因的转座子和基因特异性诱变。通过游泳试验和显微镜观察证实了突变体表型。两个报告基因在菌株 HP15 中的成功表达揭示了用于基因表达分析的有用工具,这将允许在分子水平上研究各种细菌-藻类相互作用,并深入了解海洋盆地尺度过程背后的微观过程的机制。这项研究是对 Marineobacter 物种进行遗传操作的首次报告,该物种专门与海洋硅藻相互作用,并作为模型来进一步深入分析以前报道的各种 Marineobacter-algae 相互作用。

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