Department of Zoology, Edward Grey Institute, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK.
Mol Ecol. 2011 Oct;20(19):3978-88. doi: 10.1111/j.1365-294X.2011.05243.x. Epub 2011 Aug 29.
Knowledge of dispersal-related gene flow is important for addressing many basic and applied questions in ecology and evolution. We used landscape genetics to understand the recovery of a recently expanded population of fishers (Martes pennanti) in Ontario, Canada. An important focus of landscape genetics is modelling the effects of landscape features on gene flow. Most often resistance surfaces in landscape genetic studies are built a priori based upon nongenetic field data or expert opinion. The resistance surface that best fits genetic data is then selected and interpreted. Given inherent biases in using expert opinion or movement data to model gene flow, we sought an alternative approach. We used estimates of conditional genetic distance derived from a network of genetic connectivity to parameterize landscape resistance and build a final resistance surface based upon information-theoretic model selection and multi-model averaging. We sampled 657 fishers from 31 landscapes, genotyped them at 16 microsatellite loci, and modelled the effects of snow depth, road density, river density, and coniferous forest on gene flow. Our final model suggested that road density, river density, and snow depth impeded gene flow during the fisher population expansion demonstrating that both human impacts and seasonal habitat variation affect gene flow for fishers. Our approach to building landscape genetic resistance surfaces mitigates many of the problems and caveats associated with using either nongenetic field data or expert opinion to derive resistance surfaces.
有关扩散相关基因流的知识对于解决生态学和进化中的许多基础和应用问题非常重要。我们使用景观遗传学来了解加拿大安大略省最近扩展的渔群(Martes pennanti)的恢复情况。景观遗传学的一个重要重点是建模景观特征对基因流的影响。在景观遗传学研究中,大多数情况下,抵抗面是根据非遗传实地数据或专家意见预先构建的。然后选择并解释最适合遗传数据的抵抗面。鉴于在使用专家意见或运动数据来模拟基因流时存在固有偏见,我们寻求了一种替代方法。我们使用来自遗传连通性网络的条件遗传距离估计值来参数化景观阻力,并根据信息理论模型选择和多模型平均构建最终的阻力面。我们从 31 个景观中采样了 657 只渔群,对它们进行了 16 个微卫星基因座的基因分型,并对雪深,道路密度,河流密度和针叶林对基因流的影响进行了建模。我们的最终模型表明,道路密度,河流密度和雪深阻碍了渔群扩张期间的基因流,这表明人类的影响和季节性生境变化都影响了渔群的基因流。我们构建景观遗传抵抗面的方法减轻了使用非遗传实地数据或专家意见来推导抵抗面所涉及的许多问题和注意事项。