Bennett Thomas M, Shiels Alan
Department of Ophthalmology and Visual Sciences, Washington University School of Medicine, St Louis, MO, USA.
Mol Vis. 2011;17:2255-62. Epub 2011 Aug 20.
To map and identify the genetic defect underlying autosomal dominant cataract segregating in a 5-generation Caucasian American family.
Genomic DNA was prepared from blood leukocytes, genotyping was performed using microsatellite markers, and logarithm of the odds (LOD) scores were calculated using the LINKAGE programs. Mutation profiling was performed using direct exon cycle-sequencing and restriction fragment analysis. Protein function effects were evaluated using in silico prediction algorithms.
Significant evidence of linkage was obtained at marker D13S175 (maximum LOD score [Z(max)]=3.67; maximum recombination fraction [θ(max)]=0.04) and D13S1316 (Z(max)=2.80, θ(max)=0.0). Haplotyping indicated that the disease lay in the ~170 Kb physical interval between D13S1316 and D13S175, which contained the gene for gap-junction protein alpha-3 (GJA3) or connexin-46. Sequencing of GJA3 detected a heterozygous transition (c.130G>A) in exon-2 that resulted in gain of an Hsp92 II restriction site. Allele-specific PCR amplification and restriction analysis confirmed that the novel Hsp92 II site co-segregated with cataract in the family but was not detected in 192 normal unrelated individuals. The c.130G>A transition was predicted to result in a non-conservative substitution of valine-to-methionine at codon 44 (p.V44M) with damaging effects on protein function.
These data confirm GJA3 as one of the most frequently mutated genes that underlie autosomal dominant cataract in humans, and further emphasize the importance of connexin function in maintaining lens transparency.
对一个五代美籍高加索人家族中分离的常染色体显性白内障的潜在遗传缺陷进行定位和鉴定。
从血液白细胞中提取基因组DNA,使用微卫星标记进行基因分型,并使用LINKAGE程序计算优势对数(LOD)分数。采用直接外显子循环测序和限制性片段分析进行突变分析。使用计算机预测算法评估蛋白质功能效应。
在标记D13S175(最大LOD分数[Z(max)] = 3.67;最大重组分数[θ(max)] = 0.04)和D13S1316(Z(max) = 2.80,θ(max) = 0.0)处获得了显著的连锁证据。单倍型分析表明,该疾病位于D13S1316和D13S175之间约170 Kb的物理区间内,该区间包含缝隙连接蛋白α-3(GJA3)或连接蛋白46的基因。GJA3测序检测到外显子2中的杂合转换(c.130G>A),导致Hsp92 II限制性位点增加。等位基因特异性PCR扩增和限制性分析证实,新的Hsp92 II位点与该家族中的白内障共分离,但在192名正常无关个体中未检测到。预测c.130G>A转换会导致第44位密码子处缬氨酸到甲硫氨酸的非保守替换(p.V44M),对蛋白质功能产生损害作用。
这些数据证实GJA3是人类常染色体显性白内障最常发生突变的基因之一,并进一步强调了连接蛋白功能在维持晶状体透明度方面的重要性。