拓扑探索者：可视化具有环境元数据的大型系统发育树。
TopiaryExplorer: visualizing large phylogenetic trees with environmental metadata.
机构信息
Department of Pharmacology, University of Colorado Denver, Aurora, CO 80045, USA.
出版信息
Bioinformatics. 2011 Nov 1;27(21):3067-9. doi: 10.1093/bioinformatics/btr517. Epub 2011 Sep 8.
MOTIVATION
Microbial community profiling is a highly active area of research, but tools that facilitate visualization of phylogenetic trees and associated environmental data have not kept up with the increasing quantity of data generated in these studies.
RESULTS
TopiaryExplorer supports the visualization of very large phylogenetic trees, including features such as the automated coloring of branches by environmental data, manipulation of trees and incorporation of per-tip metadata (e.g. taxonomic labels).
AVAILABILITY
http://topiaryexplorer.sourceforge.net.
CONTACT
动机
微生物群落分析是一个非常活跃的研究领域，但能够方便地可视化系统发育树和相关环境数据的工具并没有跟上这些研究中产生的大量数据。
结果
TopiaryExplorer 支持非常大的系统发育树的可视化，包括通过环境数据自动给分支着色、树的操作以及每一分支元数据（例如分类标签）的合并等功能。
可用性
http://topiaryexplorer.sourceforge.net。
联系人
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