Suppr超能文献

原肌球蛋白N端片段在0.98埃分辨率下的结构。

Structure of a tropomyosin N-terminal fragment at 0.98 Å resolution.

作者信息

Meshcheryakov Vladimir A, Krieger Inna, Kostyukova Alla S, Samatey Fadel A

机构信息

Trans-Membrane Trafficking Unit, Okinawa Institute of Science and Technology, Japan.

出版信息

Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):822-5. doi: 10.1107/S090744491102645X. Epub 2011 Aug 9.

Abstract

Tropomyosin (TM) is an elongated two-chain protein that binds along actin filaments. Important binding sites are localized in the N-terminus of tropomyosin. The structure of the N-terminus of the long muscle α-TM has been solved by both NMR and X-ray crystallography. Only the NMR structure of the N-terminus of the short nonmuscle α-TM is available. Here, the crystal structure of the N-terminus of the short nonmuscle α-TM (αTm1bZip) at a resolution of 0.98 Å is reported, which was solved from crystals belonging to space group P3(1) with unit-cell parameters a = b = 33.00, c = 52.03 Å, α = β = 90, γ = 120°. The first five N-terminal residues are flexible and residues 6-35 form an α-helical coiled coil. The overall fold and the secondary structure of the crystal structure of αTM1bZip are highly similar to the NMR structure and the atomic coordinates of the corresponding C(α) atoms between the two structures superimpose with a root-mean-square deviation of 0.60 Å. The crystal structure validates the NMR structure, with the positions of the side chains being determined precisely in our structure.

摘要

原肌球蛋白(TM)是一种沿着肌动蛋白丝结合的细长双链蛋白。重要的结合位点位于原肌球蛋白的N端。长肌α-TM的N端结构已通过核磁共振(NMR)和X射线晶体学解析。目前仅有短非肌α-TM的N端的NMR结构。在此,报道了短非肌α-TM(αTm1bZip)N端分辨率为0.98 Å的晶体结构,该结构是从属于空间群P3(1)的晶体解析得到的,其晶胞参数为a = b = 33.00,c = 52.03 Å,α = β = 90,γ = 120°。前五个N端残基是灵活的,残基6 - 35形成一个α螺旋卷曲螺旋。αTM1bZip晶体结构的整体折叠和二级结构与NMR结构高度相似,并且两个结构中相应C(α)原子的原子坐标叠加时的均方根偏差为0.60 Å。该晶体结构验证了NMR结构,在我们的结构中侧链位置得到了精确确定。

相似文献

1
Structure of a tropomyosin N-terminal fragment at 0.98 Å resolution.原肌球蛋白N端片段在0.98埃分辨率下的结构。
Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):822-5. doi: 10.1107/S090744491102645X. Epub 2011 Aug 9.
8
Structure and flexibility of the tropomyosin overlap junction.原肌球蛋白重叠连接处的结构与灵活性。
Biochem Biophys Res Commun. 2014 Mar 28;446(1):304-8. doi: 10.1016/j.bbrc.2014.02.097. Epub 2014 Mar 4.

引用本文的文献

4
Role of intrinsic disorder in muscle sarcomeres.肌节中内源性无序的作用。
Prog Mol Biol Transl Sci. 2019;166:311-340. doi: 10.1016/bs.pmbts.2019.03.014. Epub 2019 Apr 13.
8
Tropomodulins and tropomyosins: working as a team.原肌球蛋白和原肌球蛋白:协同工作。
J Muscle Res Cell Motil. 2013 Aug;34(3-4):247-60. doi: 10.1007/s10974-013-9349-6. Epub 2013 Jul 5.

本文引用的文献

1
REFMAC5 for the refinement of macromolecular crystal structures.用于大分子晶体结构精修的REFMAC5
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67. doi: 10.1107/S0907444911001314. Epub 2011 Mar 18.
2
Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
6
Scaling and assessment of data quality.数据质量的评估与分级
Acta Crystallogr D Biol Crystallogr. 2006 Jan;62(Pt 1):72-82. doi: 10.1107/S0907444905036693. Epub 2005 Dec 14.
7
The integration of macromolecular diffraction data.大分子衍射数据的整合
Acta Crystallogr D Biol Crystallogr. 2006 Jan;62(Pt 1):48-57. doi: 10.1107/S0907444905039107. Epub 2005 Dec 14.
9
PHENIX: building new software for automated crystallographic structure determination.PHENIX:用于自动晶体结构测定的新软件构建
Acta Crystallogr D Biol Crystallogr. 2002 Nov;58(Pt 11):1948-54. doi: 10.1107/s0907444902016657. Epub 2002 Oct 21.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验