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用于鉴定伪足磷酸酪氨酸蛋白的蛋白质组学方法。

Proteomics method for identification of pseudopodium phosphotyrosine proteins.

作者信息

Wang Yingchun, Klemke Richard L

机构信息

Key Laboratory of Molecular Development Biology, Insitute of Genetics and Development Bilogy, Chinese Academy of Sciences, Beijing, China.

出版信息

Methods Mol Biol. 2012;757:349-65. doi: 10.1007/978-1-61779-166-6_21.

DOI:10.1007/978-1-61779-166-6_21
PMID:21909922
Abstract

Cell migration requires actin/myosin-mediated membrane protrusion of a pseudopodium (or lamellipodium) and its attachment to the substratum. This process guides the direction of cell movement through cytoskeletal remodeling and is regulated by complex signaling networks that act spatially downstream of integrin adhesion receptors. Understanding how these regulatory networks are organized in migratory cells is important for many physiological and pathological processes, including wound healing, immune function, and cancer metastasis. Here, we describe methods for the immunoaffinity purification of phosphotyrosine proteins (pY) from pseudopodia that have been isolated from migratory cells. These methods are compatible with current mass spectrometry-based protein identification technologies and can be utilized for the large-scale identification of the pseudopodium pY proteome in various migratory cell lines, including primary and cancer cells.

摘要

细胞迁移需要肌动蛋白/肌球蛋白介导的伪足(或片状伪足)的膜突出及其与基质的附着。这个过程通过细胞骨架重塑来引导细胞运动的方向,并由在整合素粘附受体下游空间起作用的复杂信号网络调节。了解这些调节网络在迁移细胞中是如何组织的,对于许多生理和病理过程都很重要,包括伤口愈合、免疫功能和癌症转移。在这里,我们描述了从迁移细胞中分离出的伪足进行磷酸酪氨酸蛋白(pY)免疫亲和纯化的方法。这些方法与当前基于质谱的蛋白质鉴定技术兼容,可用于大规模鉴定各种迁移细胞系(包括原代细胞和癌细胞)中的伪足pY蛋白质组。

相似文献

1
Proteomics method for identification of pseudopodium phosphotyrosine proteins.用于鉴定伪足磷酸酪氨酸蛋白的蛋白质组学方法。
Methods Mol Biol. 2012;757:349-65. doi: 10.1007/978-1-61779-166-6_21.
2
Methods for pseudopodia purification and proteomic analysis.伪足纯化及蛋白质组学分析方法。
Sci STKE. 2007 Aug 21;2007(400):pl4. doi: 10.1126/stke.4002007pl4.
3
Biochemical purification of pseudopodia from migratory cells.从迁移细胞中对伪足进行生化纯化。
Methods Mol Biol. 2007;370:55-66. doi: 10.1007/978-1-59745-353-0_5.
4
Pseudopodium-enriched atypical kinase 1 regulates the cytoskeleton and cancer progression [corrected].富含伪足的非典型激酶 1 调节细胞骨架和癌症进展[已更正]。
Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10920-5. doi: 10.1073/pnas.0914776107. Epub 2010 Jun 1.
5
ERK and RhoA differentially regulate pseudopodia growth and retraction during chemotaxis.在趋化作用过程中,细胞外信号调节激酶(ERK)和RhoA对伪足的生长和回缩起着不同的调节作用。
J Biol Chem. 2003 Apr 11;278(15):13016-25. doi: 10.1074/jbc.M211873200. Epub 2003 Feb 5.
6
Purification of pseudopodia from polarized cells reveals redistribution and activation of Rac through assembly of a CAS/Crk scaffold.从极化细胞中纯化伪足可揭示通过CAS/Crk支架组装实现的Rac重新分布和激活。
J Cell Biol. 2002 Feb 18;156(4):725-36. doi: 10.1083/jcb.200111032. Epub 2002 Feb 11.
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Regulation of cell migration and survival by focal adhesion targeting of Lasp-1.通过Lasp-1的粘着斑靶向作用对细胞迁移和存活的调控
J Cell Biol. 2004 May 10;165(3):421-32. doi: 10.1083/jcb.200311045.
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Profiling signaling polarity in chemotactic cells.分析趋化细胞中的信号极性。
Proc Natl Acad Sci U S A. 2007 May 15;104(20):8328-33. doi: 10.1073/pnas.0701103104. Epub 2007 May 9.
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Protein-phosphotyrosine proteome profiling by superbinder-SH2 domain affinity purification mass spectrometry, sSH2-AP-MS.通过超级结合蛋白-SH2结构域亲和纯化质谱法(sSH2-AP-MS)进行蛋白质磷酸酪氨酸蛋白质组分析。
Proteomics. 2017 Mar;17(6). doi: 10.1002/pmic.201600360. Epub 2017 Jan 17.
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Deep Phosphotyrosine Proteomics by Optimization of Phosphotyrosine Enrichment and MS/MS Parameters.通过优化磷酸酪氨酸富集和串联质谱参数进行深度磷酸酪氨酸蛋白质组学研究
J Proteome Res. 2017 Feb 3;16(2):1077-1086. doi: 10.1021/acs.jproteome.6b00576. Epub 2016 Dec 5.

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