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水中小生物分子的模拟与中子衍射研究

Simulation and Neutron Diffraction Studies of Small Biomolecules in Water.

作者信息

Mason Philip E, Neilson George W, Price David, Saboungi Marie-Louise, Brady John W

机构信息

Department of Food Science, Stocking Hall, Cornell University, Ithaca, NY 14853, USA.

出版信息

Food Biophys. 2011 Jun;6(2):210-216. doi: 10.1007/s11483-010-9192-x.

Abstract

Modern biophysics has benefited greatly from the use of X-ray and neutron diffraction from ordered single crystals of proteins and other macromolecules to give highly detailed pictures of these molecules in the solid state. However, the most biologically relevant environments for these molecules are liquid solutions, and their liquid state properties are sensitive to details of the liquid structuring. The best experimental method for studying such structuring is also neutron diffraction, but of course, the inherent disorder of the liquid state means that these experiments cannot hope to achieve the level of informational detail available from single crystal diffraction. Nonetheless, recent advances in neutron beam intensity, beam stability, and detector sensitivity mean that it should be possible, at least in principle, to use such measurements to extract information about structuring in much more complex systems than have previously been studied. We describe a series of neutron diffraction studies of isotopically labeled molecules in aqueous solution which, when combined with results from computer simulations, can be used to extract conformational information of the hydration of the molecules themselves, essentially opening up new avenues of investigation in structural biology.

摘要

现代生物物理学从对蛋白质和其他大分子的有序单晶进行X射线和中子衍射中受益匪浅,这些衍射能给出这些分子固态时的高度详细图像。然而,这些分子在生物学上最相关的环境是液体溶液,并且它们的液态性质对液体结构细节很敏感。研究这种结构的最佳实验方法也是中子衍射,但当然,液态的固有无序意味着这些实验无法达到单晶衍射所能提供的信息细节水平。尽管如此,中子束强度、束稳定性和探测器灵敏度方面的最新进展意味着,至少在原则上,利用此类测量来提取比以前研究的系统复杂得多的系统中的结构信息应该是可行的。我们描述了一系列对水溶液中同位素标记分子的中子衍射研究,这些研究与计算机模拟结果相结合,可用于提取分子自身水化的构象信息,这实际上为结构生物学开辟了新的研究途径。

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