Suppr超能文献

中心体-蜂毒素复合物的结构、分子动力学和能量学。

The structure, molecular dynamics, and energetics of centrin-melittin complex.

机构信息

Department of Chemistry, University of Puerto Rico, Mayagüez, Puerto Rico 00681-9019.

出版信息

Proteins. 2011 Nov;79(11):3132-43. doi: 10.1002/prot.23142. Epub 2011 Aug 30.

Abstract

Centrin is a calcium binding protein (CaBP) belonging to the EF-hand superfamily. As with other proteins within this family, centrin is a calcium sensor with multiple biological target proteins. We chose to study Chlamydomonas reinhardtii centrin (Crcen) and its interaction with melittin (MLT) as a model for CaBP complexes due to its amphipathic properties. Our goal was to determine the molecular interactions that lead to centrin-MLT complex formation, their relative stability, and the conformational changes associated with the interaction, when compared to the single components. For this, we determined the thermodynamic parameters that define Crcen-MLT complex formation. Two-dimensional infrared (2D IR) correlation spectroscopy were used to study the amide I', I'*, and side chain bands for (13)C-Crcen, MLT, and the (13)C-Crcen-MLT complex. This approach resulted in the determination of MLT's increased helicity, while centrin was stabilized within the complex. Herein we provide the first complete molecular description of centrin-MLT complex formation and the dissociation process. Also, discussed is the first structure of a CaBP-MLT complex by X-ray crystallography, which shows that MLT has a different binding orientation than previously characterized centrin-bound peptides. Finally, all of the experimental results presented herein are consistent with centrin maintaining an extended conformation while interacting with MLT. The molecular implications of these results are: (1) the recognition of hydrophobic contacts as requirements for initial binding, (2) minimum electrostatic interactions within the C-terminal end of the peptide, and (3) van der Waals interactions within MLTs N-terminal end are required for complex formation.

摘要

中心体是一种钙结合蛋白(CaBP),属于 EF 手超家族。与该家族中的其他蛋白质一样,中心体是一种具有多个生物靶蛋白的钙传感器。我们选择研究莱茵衣藻中心体(Crcen)及其与蜂毒素(MLT)的相互作用作为 CaBP 复合物的模型,因为它具有两亲性。我们的目标是确定导致中心体-MLT 复合物形成的分子相互作用、它们的相对稳定性以及与单一成分相比与相互作用相关的构象变化。为此,我们确定了定义 Crcen-MLT 复合物形成的热力学参数。二维红外(2D IR)相关光谱用于研究酰胺 I'、I'*和侧链带对于(13)C-Crcen、MLT 和(13)C-Crcen-MLT 复合物。这种方法导致确定 MLT 的螺旋度增加,而中心体在复合物中稳定。本文首次提供了中心体-MLT 复合物形成和解离过程的完整分子描述。还讨论了通过 X 射线晶体学获得的第一个 CaBP-MLT 复合物结构,该结构表明 MLT 具有与以前表征的中心体结合肽不同的结合取向。最后,本文提出的所有实验结果都与中心体在与 MLT 相互作用时保持伸展构象一致。这些结果的分子意义是:(1)识别疏水性接触作为初始结合的要求,(2)肽的 C 末端内最小的静电相互作用,以及(3)MLT 的 N 末端内的范德华相互作用对于复合物的形成是必需的。

相似文献

2
Crystallization and preliminary X-ray characterization of full-length Chlamydomonas reinhardtii centrin.莱茵衣藻全长中心蛋白的结晶及初步X射线表征
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 May 1;64(Pt 5):402-4. doi: 10.1107/S1744309108009123. Epub 2008 Apr 24.
6
Inhibitory effect of melittin on endonuclease-like activity of centrin.蜂毒素对 centrin 核酸内切酶样活性的抑制作用。
J Inorg Biochem. 2018 Sep;186:280-293. doi: 10.1016/j.jinorgbio.2018.07.001. Epub 2018 Jul 5.
7
Prp40 Homolog A Is a Novel Centrin Target.Prp40同源物A是一种新型的中心粒蛋白靶点。
Biophys J. 2017 Jun 20;112(12):2529-2539. doi: 10.1016/j.bpj.2017.03.042.
9
Cation- and peptide-binding properties of human centrin 2.人中心蛋白2的阳离子和肽结合特性
FEBS Lett. 2000 Apr 28;472(2-3):208-12. doi: 10.1016/s0014-5793(00)01452-6.

引用本文的文献

3
Helical Structure of Recombinant Melittin.重组蜂毒素的螺旋结构。
J Phys Chem B. 2019 Jan 17;123(2):356-368. doi: 10.1021/acs.jpcb.8b08424. Epub 2019 Jan 4.
5
Prp40 Homolog A Is a Novel Centrin Target.Prp40同源物A是一种新型的中心粒蛋白靶点。
Biophys J. 2017 Jun 20;112(12):2529-2539. doi: 10.1016/j.bpj.2017.03.042.

本文引用的文献

3
Features and development of Coot.Coot的特点与发展
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. doi: 10.1107/S0907444910007493. Epub 2010 Mar 24.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验