Department of Chemistry, University of Puerto Rico , Mayagüez Campus, Call Box 9019, Mayagüez, Puerto Rico 00681, USA.
Struct Dyn. 2015 May 15;2(4):041711. doi: 10.1063/1.4921219. eCollection 2015 Jul.
Trifluoroacetic acid (TFA) may be the cause of the bottleneck in high resolution structure determination for protein-peptide complexes. Fragment based drug design often involves the use of synthetic peptides which contain TFA (excipient). Our goal was to explore the effects of this excipient on a model complex: centrin-melittin-TFA. We performed Fourier transform infrared, two-dimensional infrared correlation spectroscopies and spectral simulations to analyze the amide I'/I'* band for the components and the ternary complex. Melittin (MLT) was observed to have increased helicity upon its interaction with centrin, followed by the thermally induced aggregation of MLT within the ternary complex in the TFA presence.
三氟乙酸(TFA)可能是导致蛋白质-肽复合物高分辨率结构测定出现瓶颈的原因。基于片段的药物设计通常涉及使用含有 TFA(赋形剂)的合成肽。我们的目标是研究这种赋形剂对模型复合物:中心体-蜂毒素-TFA 的影响。我们进行了傅里叶变换红外、二维红外相关光谱和光谱模拟分析,以分析酰胺 I'/I'* 带的各个成分和三元复合物。当蜂毒素(MLT)与中心体相互作用时,其螺旋度增加,随后在 TFA 存在下,三元复合物中 MLT 发生热诱导聚集。