使用 Pro-origami 自动生成蛋白质结构卡通图
Automatic generation of protein structure cartoons with Pro-origami.
机构信息
Department of Computer Science and Software Engineering, The University of Melbourne Parkville Campus, Victoria 3010, Australia.
出版信息
Bioinformatics. 2011 Dec 1;27(23):3315-6. doi: 10.1093/bioinformatics/btr575. Epub 2011 Oct 12.
SUMMARY
Protein topology diagrams are 2D representations of protein structure that are particularly useful in understanding and analysing complex protein folds. Generating such diagrams presents a major problem in graph drawing, with automatic approaches often resulting in errors or uninterpretable results. Here we apply a breakthrough in diagram layout to protein topology cartoons, providing clear, accurate, interactive and editable diagrams, which are also an interface to a structural search method.
AVAILABILITY
Pro-origami is available via a web server at http://munk.csse.unimelb.edu.au/pro-origami
CONTACT
摘要
蛋白质拓扑结构图是蛋白质结构的 2D 表示形式，特别有助于理解和分析复杂的蛋白质折叠。生成这样的图表在图形绘制中是一个主要问题，自动方法通常会导致错误或不可理解的结果。在这里，我们将图表布局的突破应用于蛋白质拓扑漫画，提供清晰、准确、交互和可编辑的图表，这些图表也是结构搜索方法的接口。
可用性
Pro-origami 可通过位于 http://munk.csse.unimelb.edu.au/pro-origami 的网络服务器获得。
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