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枯草杆菌蛋白酶BPN'中催化残基间的功能相互作用

Functional interaction among catalytic residues in subtilisin BPN'.

作者信息

Carter P, Wells J A

机构信息

Department of Protein Engineering, Genentech Inc., South San Francisco, California 94080.

出版信息

Proteins. 1990;7(4):335-42. doi: 10.1002/prot.340070405.

Abstract

Variants of the serine protease, subtilisin BPN', in which the catalytic triad residues (Ser-221, His-64, and Asp-32) are replaced singly or in combination by alanine retain activities with the substrate N-succinyl-L-Ala-L-Ala-L-Pro-L-Phe-p-nitroanilide (sAAPF-pna) that are at least 10(3) to 10(4) above the non-enzymatic rate [Carter, P., Wells, J.A. Nature (London) 322:564-568, 1988]. A possible source of the residual activity was the hydrogen bond with the N delta 2 of Asn-155 that helps to stabilize the oxyanion generated in the tetrahedral transition state during amide bond hydrolysis by the wild-type enzyme. Replacing Asn-155 by Gly (N155G) lowers the turnover number (kcat) for sAAPF-pna by 150-fold with virtually no change in the Michaelis constant (KM). However, upon combining the N155G and S221A mutations to give N155G:S221A, kcat is actually 5-fold greater than for the S221A enzyme. Thus, the catalytic role of Asn-155 is dependent upon the presence of Ser-221. The residual activity of the N155G:S221A enzyme (approximately 10(4)-fold above the uncatalyzed rate) is not an artifact because it can be completely inhibited by the third domain of the turkey ovomucoid inhibitor (OMTKY3), which forms a strong 1:1 complex with the active site. The mutations N155G and S221A individually weaken the interaction between subtilisin and OMTKY3 by 1.8 and 2.0 kcal/mol, respectively, and in combination by 2.1 kcal/mol. This is consistent with disruption of stabilizing interactions around the reactive site carbonyl of the OMTKY3 inhibitor.(ABSTRACT TRUNCATED AT 250 WORDS)

摘要

丝氨酸蛋白酶枯草杆菌蛋白酶BPN'的变体中,催化三联体残基(Ser-221、His-64和Asp-32)被丙氨酸单独或组合取代后,对底物N-琥珀酰-L-丙氨酸-L-丙氨酸-L-脯氨酸-L-苯丙氨酸对硝基苯胺(sAAPF-pna)仍保持活性,其活性比非酶促反应速率至少高10³至10⁴倍[卡特,P.,韦尔斯,J.A.《自然》(伦敦)322:564 - 568,1988]。残余活性的一个可能来源是与Asn-155的Nδ2形成的氢键,该氢键有助于稳定野生型酶在酰胺键水解过程中四面体过渡态产生的氧阴离子。用Gly取代Asn-155(N155G)使sAAPF-pna的周转数(kcat)降低150倍,而米氏常数(KM)几乎没有变化。然而,将N155G和S221A突变组合得到N155G:S221A时,kcat实际上比S221A酶高5倍。因此,Asn-155的催化作用取决于Ser-221的存在。N155G:S221A酶的残余活性(比未催化速率高约10⁴倍)不是假象,因为它可被火鸡卵类粘蛋白抑制剂(OMTKY3)的第三个结构域完全抑制,该结构域与活性位点形成强1:1复合物。N155G和S221A突变分别使枯草杆菌蛋白酶与OMTKY3之间的相互作用减弱1.8和2.0千卡/摩尔,组合后减弱2.1千卡/摩尔。这与OMTKY3抑制剂活性位点羰基周围稳定相互作用的破坏一致。(摘要截短于250字)

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