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使用 cDNA 微阵列对不同发育节片的孟氏迭宫绦虫进行基因表达谱分析。

Gene expression profiling of in Moniezia expansa at different developmental proglottids using cDNA microarray.

机构信息

Genetic Engineering Laboratory, The Breed & Biotechnology Key Laboratory of Sheep in XinJiang Bingtuan/Animal Husbandry and Veterinary Institute, Xinjiang Academy of Agricultural and Reclamation Science, Shihezi, 832000, People's Republic of China.

出版信息

Mol Biol Rep. 2012 Apr;39(4):4499-507. doi: 10.1007/s11033-011-1240-1. Epub 2011 Oct 16.

Abstract

Gene expression profiles of Moniezia expansa proglottids at varying developmental stages were analysed using cDNA microarray. A total of 4,056 spots, including full length and partial complementary DNAs that represent novel, known, and control genes, were studied. Results indicated an up-regulation of 55 genes in immature proglottids, 134 genes in mature proglottids and 103 genes in gravid proglottids were up-regulated, and a down-regulation of 7 genes in immature proglottids, 68 genes in mature proglottids and 78 genes in gravid proglottids compared to controls (scolex-neck proglottids). Many of these genes were identified as transcription factors and were involved in functions such as metabolism, transport, protein biosynthesis, apoptosis, cell differentiation, cell communication and nucleic acid binding. Expression level alterations in UBE2A, Cavβ, RAD51, DAZ, PKAc and 2 unknown genes were confirmed by real-time quantitative polymerase chain reaction (RT-PCR). The complete microarray data set has been deposited in the NCBI Gene Expression Omnibus, GEO Series accession number GSE13982. Results provide a gene expression profile at various development stages of M. expansa proglottids, which prove invaluable in understanding the pathogenesis of the tapeworm and studying the genes concerned with reproductive organ development.

摘要

使用 cDNA 微阵列分析了处于不同发育阶段的孟氏孟氏绦虫节片的基因表达谱。共研究了 4056 个斑点,包括全长和部分 cDNA,代表新的、已知的和对照基因。结果表明,未成熟节片中有 55 个基因上调,成熟节片中有 134 个基因上调,孕节中有 103 个基因上调,而未成熟节片中有 7 个基因下调,成熟节片中有 68 个基因下调,孕节中有 78 个基因下调与对照(头节-颈节节片)相比。其中许多基因被鉴定为转录因子,参与代谢、运输、蛋白质生物合成、细胞凋亡、细胞分化、细胞通讯和核酸结合等功能。通过实时定量聚合酶链反应(RT-PCR)证实了 UBE2A、Cavβ、RAD51、DAZ、PKAc 和 2 个未知基因的表达水平变化。完整的微阵列数据集已存入 NCBI Gene Expression Omnibus,GEO 系列注册号 GSE13982。结果提供了孟氏绦虫节片在不同发育阶段的基因表达谱,这对于了解绦虫的发病机制和研究与生殖器官发育有关的基因非常有价值。

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