Department of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA.
J Chem Phys. 2011 Oct 14;135(14):144107. doi: 10.1063/1.3649947.
The analytic energy gradients in combined second order Møller-Plesset perturbation theory and conductorlike polarizable continuum model calculations are derived and implemented for spin-restricted closed shell (RMP2), Z-averaged spin-restricted open shell (ZAPT2), and spin-unrestricted open shell (UMP2) cases. Using these methods, the geometries of the S(0) ground state and the T(1) state of three nucleobase pairs (guanine-cytosine, adenine-thymine, and adenine-uracil) in the gas phase and aqueous solution phase are optimized. It is found that in both the gas phase and the aqueous solution phase the hydrogen bonds in the T(1) state pairs are weakened by ~1 kcal/mol as compared to those in the S(0) state pairs.
在组合二阶 Møller-Plesset 微扰理论和导体极化连续模型计算中推导并实现了分析能量梯度,用于自旋限制闭壳层(RMP2)、Z 平均自旋限制开壳层(ZAPT2)和自旋非限制开壳层(UMP2)情况。使用这些方法,优化了三种核苷酸碱基对(鸟嘌呤-胞嘧啶、腺嘌呤-胸腺嘧啶和腺嘌呤-尿嘧啶)在气相和水相中的 S(0)基态和 T(1)态的几何形状。结果发现,与 S(0)态对相比,T(1)态对的氢键在气相和水相中的强度均减弱了约 1 kcal/mol。