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大陆岛屿的生物地理学:利用 16S rRNA 和 COI 研究塔斯马尼亚遗留特有蜈蚣 Craterostigmus tasmanianus(唇足纲,裂胸目)的种群结构

Biogeography in a continental island: population structure of the relict endemic centipede Craterostigmus tasmanianus (Chilopoda, Craterostigmomorpha) in Tasmania using 16S rRNA and COI.

机构信息

Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.

出版信息

J Hered. 2012 Jan-Feb;103(1):80-91. doi: 10.1093/jhered/esr110. Epub 2011 Nov 3.

Abstract

We used 16S ribosomal RNA (rRNA) and cytochrome c oxidase subunit I (COI) sequence data to investigate the population structure in the centipede Craterostigmus tasmanianus Pocock, 1902 (Chilopoda: Craterostigmomorpha: Craterostigmidae) and to look for possible barriers to gene flow on the island of Tasmania, where C. tasmanianus is a widespread endemic. We first confirmed a molecular diagnostic character in 28S rRNA separating Tasmanian Craterostigmus from its sister species Craterostigmus crabilli (Edgecombe and Giribet 2008) in New Zealand and found no shared polymorphism in this marker for the 2 species. In Tasmania, analysis of molecular variance analysis showed little variation at the 16S rRNA and COI loci within populations (6% and 13%, respectively), but substantial variation (56% and 48%, respectively) among populations divided geographically into groups. We found no clear evidence of isolation by distance using a Mantel test. Bayesian clustering and gene network analysis both group the C. tasmanianus populations in patterns which are broadly concordant with previously known biogeographical divisions within Tasmania, but we did not find that genetic distance varied in a simple way across cluster boundaries. The coarse-scale geographical sampling on which this study was based should be followed in the future by sampling at a finer spatial scale and to investigate genetic structure within clusters and across cluster boundaries.

摘要

我们使用 16S 核糖体 RNA(rRNA)和细胞色素 c 氧化酶亚基 I (COI)序列数据来研究千足虫 Craterostigmus tasmanianus Pocock, 1902(唇足纲:Craterostigmomorpha:Craterostigmidae)的种群结构,并寻找塔斯马尼亚岛可能存在的基因流动障碍,在塔斯马尼亚岛,C. tasmanianus 是一种广泛分布的特有种。我们首先在 28S rRNA 中确认了一个分子诊断特征,该特征将塔斯马尼亚 Craterostigmus 与其在新西兰的姐妹种 Craterostigmus crabilli (Edgecombe and Giribet 2008)区分开来,并且在这一标记中没有发现这两个物种的共享多态性。在塔斯马尼亚,16S rRNA 和 COI 基因座的分子方差分析显示种群内的变异很小(分别为 6%和 13%),但地理上分为群体的种群之间存在很大的变异(分别为 56%和 48%)。我们使用 Mantel 检验发现没有明显的距离隔离证据。贝叶斯聚类和基因网络分析都将 C. tasmanianus 种群聚类为与塔斯马尼亚以前已知的生物地理划分大致一致的模式,但我们没有发现遗传距离在聚类边界上呈简单变化。未来应该在更精细的空间尺度上进行采样,并调查聚类内和聚类边界的遗传结构,以进一步研究。

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