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Lactic acid bacteria dynamics during spontaneous fermentation of cocoa beans verified by culture-independent denaturing gradient gel electrophoresis.

作者信息

Santos T F, Santana L K A, Santos A C F, Silva G S, Romano C C, Dias J C T, Rezende R P

机构信息

Laboratório de Biotecnologia Microbiológica, Departamento de Ciências Biológicas, Universidade de Santa Cruz, Ilhéus, BA, Brasil.

出版信息

Genet Mol Res. 2011 Nov 4;10(4):2702-9. doi: 10.4238/2011.November.4.3.

DOI:10.4238/2011.November.4.3
PMID:22095596
Abstract

Cocoa is naturally fermented in the field before the cocoa seeds are removed for processing. We assessed the dynamics of lactic acid bacteria during cocoa fermentation in Bahia, Brazil. During five days of fermentation, temperature and pH were measured and beans were collected for genomic DNA extraction every 12 h. The DNA was used as a template for amplification with Lac1-Lac2 and Lac3-Lac2 for denaturing gradient gel electrophoresis analyses. pH values ranged from 3.34 to 4.98, while the temperature varied from 23° to 50°C. Lac1-Lac2 primers permitted detection of 11 operational taxonomic units. Twenty-eight operational taxonomic units were obtained with the primer pair Lac3-Lac2. It was observed that there were variations between the numbers of operational taxonomic units throughout the process, probably because of changes in pH and temperature. The greatest similarity in amplified samples was obtained with the primers Lac3-Lac2.

摘要

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