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二倍体银合欢(豆科;含羞草亚科)的系统发育和种群遗传分析揭示了隐存种多样性和分歧的异域物种形成模式。

Phylogenetic and population genetic analyses of diploid Leucaena (Leguminosae; Mimosoideae) reveal cryptic species diversity and patterns of divergent allopatric speciation.

机构信息

Department of Biology, New Mexico State University, Las Cruces, 88001, USA.

出版信息

Am J Bot. 2011 Dec;98(12):2049-63. doi: 10.3732/ajb.1100259. Epub 2011 Nov 28.

Abstract

PREMISE OF THE STUDY

Leucaena comprises 17 diploid species, five tetraploid species, and a complex series of hybrids whose evolutionary histories have been influenced by human seed translocation, cultivation, and subsequent spontaneous hybridization. Here we investigated patterns of evolutionary divergence among diploid Leucaena through comprehensively sampled multilocus phylogenetic and population genetic approaches to address species delimitation, interspecific relationships, hybridization, and the predominant mode of speciation among diploids.

METHODS

Parsimony- and maximum-likelihood-based phylogenetic approaches were applied to 59 accessions sequenced for six SCAR-based nuclear loci, nrDNA ITS, and four cpDNA regions. Population genetic comparisons included 1215 AFLP loci representing 42 populations and 424 individuals.

RESULTS

Phylogenetic results provided a well-resolved hypothesis of divergent species relationships, recovering previously recognized clades of diploids as well as newly resolved relationships. Phylogenetic and population genetic assessments identified two cryptic species that are consistent with geography and morphology.

CONCLUSIONS

Findings from this study highlight the importance and utility of multilocus data in the recovery of complex evolutionary histories. The results are consistent with allopatric divergence representing the predominant mode of speciation among diploid Leucaena. These findings contrast with the potential hybrid origin of several tetraploid species and highlight the importance of human translocation of seed to the origin of these tetraploids. The recognition of one previously unrecognized species (L. cruziana) and the elevation of another taxon (L. collinsii subsp. zacapana) to specific status (L. zacapana) is consistent with a growing number of newly diagnosed species from neotropical seasonally dry forests, suggesting these communities harbor greater species diversity than previously recognized.

摘要

研究前提

银合欢包含 17 个二倍体种、5 个四倍体种以及一系列复杂的杂种,这些杂种的进化历史受到人类种子转移、栽培以及随后自发杂交的影响。在这里,我们通过全面采样的多位点系统发育和群体遗传学方法来研究二倍体银合欢的进化分歧模式,以解决种的界定、种间关系、杂交以及二倍体中主要的物种形成模式等问题。

方法

采用简约法和最大似然法对 59 个来自六个基于 SCAR 的核基因座、nrDNA ITS 和四个 cpDNA 区的序列进行了分析。群体遗传学比较包括代表 42 个种群和 424 个个体的 1215 个 AFLP 基因座。

结果

系统发育结果提供了一个分化物种关系的良好解决假设,恢复了以前公认的二倍体分支,以及新解决的关系。系统发育和群体遗传评估确定了两个隐种,它们与地理和形态一致。

结论

本研究的结果强调了多基因座数据在恢复复杂进化历史中的重要性和实用性。结果与代表二倍体银合欢主要物种形成模式的地理隔离分歧一致。这些发现与几个四倍体物种的潜在杂种起源形成对比,并强调了人类种子转移对这些四倍体起源的重要性。一个以前未被识别的种(L. cruziana)的识别和另一个分类群(L. collinsii subsp. zacapana)提升到特定状态(L. zacapana)与越来越多从季节性干旱森林中新诊断的物种一致,这表明这些群落比以前所认识的具有更大的物种多样性。

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