Medicinal & Natural Products Chemistry Research Center, Shiraz University of Medical Sciences, Shiraz 71345, Iran.
Chem Biol Drug Des. 2012 Apr;79(4):442-58. doi: 10.1111/j.1747-0285.2011.01284.x. Epub 2012 Jan 30.
The apoptosis-inducing activity data of a series of 4-aryl-4H-chromenes based on three cell lines (human breast cancer cell line T47D, human non-smal cell lung cancer cell line H1299, and human colorectal cancer cell line DLD-1) have been subjected to quantitative structure-activity relationship (QSAR) analysis. A collection of chemometrics methods including multiple linear regression (MLR), factor analysis-based multiple linear regression (FA-MLR), principal component regression (PCR), and partial least squared combined with genetic algorithm for variable selection (GA-PLS) were employed to make connections between structural parameters and induction of apoptosis in three different cell lines. Models of high statistical qualities were obtained for each cell line using GA-PLS method. The results revealed that 2D autocorrelation descriptors and dipole moments as a quantum chemical parameter are important structural parameters that significantly influence the activity in all three types of cell lines. However, the determinant descriptors for activity of compounds in H1299 cell line were partly different from the two other cell lines, which might be deduce that the studied compounds induce apoptosis through a different mechanism of action.
基于三种细胞系(人乳腺癌细胞系 T47D、人非小细胞肺癌细胞系 H1299 和人结肠直肠癌细胞系 DLD-1)的一系列 4-芳基-4H-色烯的细胞凋亡诱导活性数据已经进行了定量构效关系(QSAR)分析。采用了一系列化学计量学方法,包括多元线性回归(MLR)、基于因子分析的多元线性回归(FA-MLR)、主成分回归(PCR)和偏最小二乘结合遗传算法变量选择(GA-PLS),以建立结构参数与三种不同细胞系中细胞凋亡诱导之间的关系。使用 GA-PLS 方法为每种细胞系获得了具有高统计学质量的模型。结果表明,二维自相关描述符和偶极矩作为量子化学参数是重要的结构参数,它们显著影响所有三种细胞系中的活性。然而,化合物在 H1299 细胞系中的活性的决定描述符与另外两种细胞系部分不同,这可能表明研究的化合物通过不同的作用机制诱导细胞凋亡。