Key Laboratory of Molecular Virology & Immunology, Institute Pasteur of Shanghai, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200025, China.
Virol J. 2011 Dec 13;8:534. doi: 10.1186/1743-422X-8-534.
Coxsackievirus A16 (CVA16) is a member of the Enterovirus genus of the Picornaviridae family and it is a major etiological agent of hand, foot, and mouth disease (HFMD), which is a common illness affecting children. CVA16 possesses a single-stranded positive-sense RNA genome containing approximately 7410 bases. Current understanding of the replication, structure and virulence determinants of CVA16 is very limited, partly due to difficulties in directly manipulating its RNA genome.
Two overlapping cDNA fragments were amplified by RT-PCR from the genome of the shzh05-1 strain of CVA16, encompassing the nucleotide regions 1-4392 and 4381-7410, respectively. These two fragments were then joined via a native XbaI site to yield a full-length cDNA. A T7 promoter and poly(A) tail were added to the 5' and 3' ends, respectively, forming a full CVA16 cDNA clone. Transfection of RD cells in vitro with RNA transcribed directly from the cDNA clone allowed the recovery of infectious virus in culture. The CVA16 virus recovered from these cultures was functionally and genetically identical to its parent strain.
We report the first construction and characterization of an infectious cDNA clone of CVA16. The availability of this infectious clone will greatly enhance future virological investigations and vaccine development for CVA16.
柯萨奇病毒 A16(CVA16)是小核糖核酸病毒科肠道病毒属的一种病毒,是引起手足口病(HFMD)的主要病原体之一,HFMD 是一种常见的儿童疾病。CVA16 拥有单链正链 RNA 基因组,约包含 7410 个碱基。目前对于 CVA16 的复制、结构和毒力决定因素的了解非常有限,部分原因是直接操纵其 RNA 基因组存在困难。
通过 RT-PCR 从 CVA16 的 shzh05-1 株基因组中扩增了两个重叠的 cDNA 片段,分别涵盖核苷酸区域 1-4392 和 4381-7410。然后通过天然的 XbaI 位点将这两个片段连接起来,得到全长 cDNA。在 5'和 3'端分别添加了 T7 启动子和 poly(A)尾,形成全长 CVA16 cDNA 克隆。直接从 cDNA 克隆转录的 RNA 转染 RD 细胞可在体外培养中恢复感染性病毒。从这些培养物中回收的 CVA16 病毒在功能和遗传上与其亲本株完全相同。
我们首次构建并鉴定了 CVA16 的感染性 cDNA 克隆。该感染性克隆的可用性将极大地促进未来对 CVA16 的病毒学研究和疫苗开发。