Department of Biological Sciences, Purdue University, 240 S. Martin Jischke Drive, West Lafayette, IN 47907-2032, USA.
Proc Natl Acad Sci U S A. 2012 Jan 17;109(3):817-22. doi: 10.1073/pnas.1110224109. Epub 2011 Dec 29.
Tailed DNA bacteriophages assemble empty procapsids that are subsequently filled with the viral genome by means of a DNA packaging machine situated at a special fivefold vertex. The packaging machine consists of a "small terminase" and a "large terminase" component. One of the functions of the small terminase is to initiate packaging of the viral genome, whereas the large terminase is responsible for the ATP-powered translocation of DNA. The small terminase subunit has three domains, an N-terminal DNA-binding domain, a central oligomerization domain, and a C-terminal domain for interacting with the large terminase. Here we report structures of the central domain in two different oligomerization states for a small terminase from the T4 family of phages. In addition, we report biochemical studies that establish the function for each of the small terminase domains. On the basis of the structural and biochemical information, we propose a model for DNA packaging initiation.
有尾 DNA 噬菌体组装空衣壳,随后通过位于特殊五重顶点的 DNA 包装机制将病毒基因组填充到衣壳中。该包装机制由一个“小终止酶”和一个“大终止酶”组件组成。小终止酶的功能之一是启动病毒基因组的包装,而大终止酶则负责 ATP 驱动的 DNA 易位。小终止酶亚基有三个结构域,一个 N 端 DNA 结合域、一个中心寡聚化域和一个与大终止酶相互作用的 C 端结构域。本文报道了 T4 噬菌体家族中小终止酶在两种不同寡聚化状态下的中心结构域的结构,此外还报道了确定小终止酶各结构域功能的生化研究。基于结构和生化信息,本文提出了 DNA 包装起始的模型。