• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

小生物分子水合物中水分子的立体化学

The stereochemistry of the water molecules in the hydrates of small biological molecules.

作者信息

Jeffrey G A, Maluszynska H

机构信息

Department of Crystallography, University of Pittsburgh, PA 15260.

出版信息

Acta Crystallogr B. 1990 Aug 1;46 ( Pt 4):546-9. doi: 10.1107/s0108768190001562.

DOI:10.1107/s0108768190001562
PMID:2222940
Abstract

An examination of the stereochemistry of the water molecules in the hydrates of amino acids and peptides, carbohydrates, purines and pyrimidines, and nucleosides and nucleotides, reveals a variety of hydrogen-bonded configurations within a radius of 3.0 A from the water oxygen atom. Water molecules which accept one hydrogen bond are more common than those that accept two, by a factor of 1.4. There are nine examples where the water is not a hydrogen-bond acceptor, but only one where it does not donate two hydrogen bonds. Of the 621 OWH...A bonds examined, 15% were three centered and 2% were four centered or three-center bifurcated. The amino-acid and peptide hydrates displayed the greatest variety with 15 different hydrogen-bond configurations. The coordination of the donor and acceptor atoms within 3.0 A of the water oxygen atom ranged from two to seven.

摘要

对氨基酸和肽、碳水化合物、嘌呤和嘧啶以及核苷和核苷酸水合物中水分子的立体化学进行研究后发现,在距水氧原子3.0埃的半径范围内存在多种氢键构型。接受一个氢键的水分子比接受两个氢键的水分子更常见,比例为1.4倍。有九个例子中,水不是氢键受体,但只有一个例子中,水不提供两个氢键。在所研究的621个OWH...A键中,15%是三中心的,2%是四中心或三中心分叉的。氨基酸和肽水合物呈现出最多样化的15种不同氢键构型。在距水氧原子3.0埃范围内,供体和受体原子的配位范围为2至7。

相似文献

1
The stereochemistry of the water molecules in the hydrates of small biological molecules.小生物分子水合物中水分子的立体化学
Acta Crystallogr B. 1990 Aug 1;46 ( Pt 4):546-9. doi: 10.1107/s0108768190001562.
2
Water molecules which apparently accept no hydrogen bonds are systematically involved in C-H...O interactions.那些明显不接受氢键的水分子系统地参与了碳氢键……氧相互作用。
Acta Crystallogr D Biol Crystallogr. 1995 Jan 1;51(Pt 1):93-7. doi: 10.1107/S0907444994007614.
3
Proton transfer through hydrogen bonds in two-dimensional water layers: a theoretical study based on ab initio and quantum-classical simulations.二维水层中通过氢键的质子转移:基于从头算和量子经典模拟的理论研究
J Chem Phys. 2015 Jan 28;142(4):044701. doi: 10.1063/1.4905495.
4
Hydration of ions in two-dimensional water.二维水中离子的水合作用。
Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Oct;92(4):042152. doi: 10.1103/PhysRevE.92.042152. Epub 2015 Oct 26.
5
Water molecules hydrogen bonding to aromatic acceptors of amino acids: the structure of Tyr-Tyr-Phe dihydrate and a crystallographic database study on peptides.水分子与氨基酸的芳香族受体形成氢键:酪氨酸-酪氨酸-苯丙氨酸二水合物的结构及对肽的晶体学数据库研究。
Acta Crystallogr D Biol Crystallogr. 1998 Jan 1;54(Pt 1):25-31. doi: 10.1107/s0907444997007981.
6
Statistical and molecular dynamics studies of buried waters in globular proteins.球状蛋白质中埋藏水的统计与分子动力学研究。
Proteins. 2005 Aug 15;60(3):450-63. doi: 10.1002/prot.20511.
7
Molecular mechanism of H+ conduction in the single-file water chain of the gramicidin channel.短杆菌肽通道单排水分子链中H⁺传导的分子机制。
Biophys J. 2002 May;82(5):2304-16. doi: 10.1016/S0006-3495(02)75576-8.
8
An ab initio molecular dynamics study on hydrogen bonds between water molecules.从头算分子动力学研究水分子之间的氢键。
J Chem Phys. 2012 Apr 28;136(16):164313. doi: 10.1063/1.4705371.
9
Chiral one- and two-dimensional silver(I)-biotin coordination polymers.手性一维和二维银(I)-生物素配位聚合物。
Acta Crystallogr C. 2013 Feb;69(Pt 2):127-37. doi: 10.1107/S0108270113000322. Epub 2013 Jan 22.
10
Do water molecules mediate protein-DNA recognition?水分子介导蛋白质与DNA的识别吗?
J Mol Biol. 2001 Nov 30;314(3):619-32. doi: 10.1006/jmbi.2001.5154.

引用本文的文献

1
On the hydration state of amino acids and their derivatives at different ionization States: a comparative multinuclear NMR and crystallographic investigation.
J Amino Acids. 2012;2012:565404. doi: 10.1155/2012/565404. Epub 2012 May 14.