Do baryons trace dark matter in the early universe?

Baryon-density perturbations of large amplitude may exist if they are compensated by dark-matter perturbations such that the total density is unchanged. Primordial abundances and galaxy clusters allow these compensated isocurvature perturbations (CIPs) to have amplitudes as large as ~10%. CIPs will modulate the power spectrum of cosmic microwave background (CMB) fluctuations--those due to the usual adiabatic perturbations--as a function of position on the sky. This leads to correlations between different spherical-harmonic coefficients of the temperature and/or polarization maps, and induces polarization B modes. Here, the magnitude of these effects is calculated and techniques to measure them are introduced. While a CIP of this amplitude can be probed on large scales with existing data, forthcoming CMB experiments should improve the sensitivity to CIPs by at least an order of magnitude.