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脆性X相关疾病和弗里德赖希共济失调的发育与病理学中的染色质变化。

Chromatin changes in the development and pathology of the Fragile X-associated disorders and Friedreich ataxia.

作者信息

Kumari Daman, Lokanga Rachel, Yudkin Dmitry, Zhao Xiao-Nan, Usdin Karen

机构信息

Section on Gene Structure and Disease, Laboratory of Cell and Molecular Biology, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-0830, USA.

出版信息

Biochim Biophys Acta. 2012 Jul;1819(7):802-10. doi: 10.1016/j.bbagrm.2011.12.009. Epub 2012 Jan 5.

Abstract

The Fragile X-associated disorders (FXDs) and Friedreich ataxia (FRDA) are genetic conditions resulting from expansion of a trinucleotide repeat in a region of the affected gene that is transcribed but not translated. In the case of the FXDs, pathology results from expansion of CGG•CCG-repeat tract in the 5' UTR of the FMR1 gene, while pathology in FRDA results from expansion of a GAA•TTC-repeat in intron 1 of the FXN gene. Expansion occurs during gametogenesis or early embryogenesis by a mechanism that is not well understood. Associated Expansion then produces disease pathology in various ways that are not completely understood either. In the case of the FXDs, alleles with 55-200 repeats express higher than normal levels of a transcript that is thought to be toxic, while alleles with >200 repeats are silenced. In addition, alleles with >200 repeats are associated with a cytogenetic abnormality known as a fragile site, which is apparent as a constriction or gap in the chromatin that is seen when cells are grown in presence of inhibitors of thymidylate synthase. FRDA alleles show a deficit of the FXN transcript. This review will address the role of repeat-mediated chromatin changes in these aspects of FXD and FRDA disease pathology. This article is part of a Special Issue entitled: Chromatin in time and space.

摘要

脆性X相关疾病(FXDs)和弗里德赖希共济失调(FRDA)是由受影响基因区域中三核苷酸重复序列扩增导致的遗传性疾病,该区域可转录但不翻译。就FXDs而言,病理结果是由于FMR1基因5'非翻译区(UTR)中CGG•CCG重复序列的扩增,而FRDA的病理结果是由于FXN基因第1内含子中GAA•TTC重复序列的扩增。扩增发生在配子发生或早期胚胎发生过程中,其机制尚不清楚。随后的相关扩增也以各种尚未完全了解的方式产生疾病病理。就FXDs而言,具有55 - 200个重复序列的等位基因表达的转录本水平高于正常水平,该转录本被认为具有毒性,而具有>200个重复序列的等位基因则被沉默。此外,具有>200个重复序列的等位基因与一种称为脆性位点的细胞遗传学异常有关,当细胞在胸苷酸合成酶抑制剂存在的情况下生长时,这种异常表现为染色质中的收缩或间隙。FRDA等位基因显示FXN转录本不足。本综述将探讨重复介导的染色质变化在FXD和FRDA疾病病理这些方面的作用。本文是名为:《时空染色质》的特刊的一部分。

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本文引用的文献

1
Molecular mechanisms of long noncoding RNAs.
Mol Cell. 2011 Sep 16;43(6):904-14. doi: 10.1016/j.molcel.2011.08.018.
2
Hyperexpansion of GAA repeats affects post-initiation steps of FXN transcription in Friedreich's ataxia.
Nucleic Acids Res. 2011 Oct;39(19):8366-77. doi: 10.1093/nar/gkr542. Epub 2011 Jul 10.
4
Tight protein-DNA interactions favor gene silencing.
Genes Dev. 2011 Jul 1;25(13):1365-70. doi: 10.1101/gad.611011.
5
Cockayne syndrome B protein antagonizes OGG1 in modulating CAG repeat length in vivo.
Aging (Albany NY). 2011 May;3(5):509-14. doi: 10.18632/aging.100324.
6
Differential usage of transcriptional start sites and polyadenylation sites in FMR1 premutation alleles.
Nucleic Acids Res. 2011 Aug;39(14):6172-85. doi: 10.1093/nar/gkr100. Epub 2011 Apr 7.
7
Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site.
Nature. 2011 Feb 3;470(7332):120-3. doi: 10.1038/nature09745. Epub 2011 Jan 23.
9
Repeat expansion affects both transcription initiation and elongation in friedreich ataxia cells.
J Biol Chem. 2011 Feb 11;286(6):4209-15. doi: 10.1074/jbc.M110.194035. Epub 2010 Dec 2.

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