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本文引用的文献

1
Clustering heterochromatin: Sir3 promotes telomere clustering independently of silencing in yeast.凝聚异染色质:Sir3 蛋白在酵母中独立于沉默促进端粒的凝聚。
J Cell Biol. 2011 Feb 7;192(3):417-31. doi: 10.1083/jcb.201008007.
2
The budding yeast nucleus.芽殖酵母核。
Cold Spring Harb Perspect Biol. 2010 Aug;2(8):a000612. doi: 10.1101/cshperspect.a000612. Epub 2010 Jun 16.
3
Ume6 is required for the MATa/MATalpha cellular identity and transcriptional silencing in Kluyveromyces lactis.Ume6 对于克鲁维酵母的 MATa/MATalpha 细胞特征和转录沉默是必需的。
Genetics. 2010 Apr;184(4):999-1011. doi: 10.1534/genetics.110.114678. Epub 2010 Feb 5.
4
Histone H3 N-terminus regulates higher order structure of yeast heterochromatin.组蛋白H3的N端调控酵母异染色质的高级结构。
Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13153-9. doi: 10.1073/pnas.0906866106. Epub 2009 Aug 3.
5
Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae.在酿酒酵母中,高度转录的RNA聚合酶II基因会阻碍复制叉的前进。
Mol Cell. 2009 Jun 26;34(6):722-34. doi: 10.1016/j.molcel.2009.05.022.
6
Life on the edge: telomeres and persistent DNA breaks converge at the nuclear periphery.边缘生活:端粒与持续性DNA断裂在核周汇聚。
Genes Dev. 2009 May 1;23(9):1027-31. doi: 10.1101/gad.1805309.
7
Dynamics of telomeres and promyelocytic leukemia nuclear bodies in a telomerase-negative human cell line.端粒酶阴性人类细胞系中端粒与早幼粒细胞白血病核体的动态变化
Mol Biol Cell. 2009 Apr;20(7):2070-82. doi: 10.1091/mbc.e08-02-0108. Epub 2009 Feb 11.
8
Tracking of controlled Escherichia coli replication fork stalling and restart at repressor-bound DNA in vivo.体内追踪受控大肠杆菌复制叉在阻遏物结合的DNA处的停滞与重启
EMBO J. 2006 Jun 7;25(11):2596-604. doi: 10.1038/sj.emboj.7601155. Epub 2006 May 25.
9
Control of replication initiation and heterochromatin formation in Saccharomyces cerevisiae by a regulator of meiotic gene expression.减数分裂基因表达调控因子对酿酒酵母复制起始和异染色质形成的控制
Genes Dev. 2005 Aug 1;19(15):1811-22. doi: 10.1101/gad.334805.
10
Tandem repetitive transgenes and fluorescent chromatin tags alter local interphase chromosome arrangement in Arabidopsis thaliana.串联重复转基因和荧光染色质标签改变了拟南芥间期染色体的局部排列。
J Cell Sci. 2005 Aug 15;118(Pt 16):3751-8. doi: 10.1242/jcs.02498. Epub 2005 Aug 2.

紧密的蛋白-DNA 相互作用有利于基因沉默。

Tight protein-DNA interactions favor gene silencing.

机构信息

Institut Curie, Paris, F-75248 France.

出版信息

Genes Dev. 2011 Jul 1;25(13):1365-70. doi: 10.1101/gad.611011.

DOI:10.1101/gad.611011
PMID:21724830
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3134080/
Abstract

The heterochromatin-like structure formed by the yeast silent information regulator complex (SIR) represses transcription at the silent mating type loci and telomeres. Here, we report that tight protein-DNA complexes induce ectopic recruitment of the SIR complex, promoting gene silencing and changes in subnuclear localization when cis-acting elements are nearby. Importantly, lack of the replication fork-associated helicase Rrm3 enhances this induced gene repression. Additionally, Sir3 and Sir4 are enriched genome-wide at natural replication pause sites, including tRNA genes. Consistently, inserting a tRNA gene promotes SIR-mediated silencing of a nearby gene. These results reveal that replication stress arising from tight DNA-protein interactions favors heterochromatin formation.

摘要

酵母沉默信息调节复合物(SIR)形成的异染色质样结构可抑制沉默交配型基因座和端粒的转录。在这里,我们报告说,紧密的蛋白质-DNA 复合物诱导 SIR 复合物的异位募集,促进基因沉默,并在顺式作用元件附近时改变亚核定位。重要的是,缺乏与复制叉相关的解旋酶 Rrm3 会增强这种诱导的基因抑制。此外,Sir3 和 Sir4 在自然复制暂停位点(包括 tRNA 基因)的全基因组范围内富集。一致地,插入一个 tRNA 基因可促进 SIR 介导的附近基因沉默。这些结果表明,来自紧密的 DNA-蛋白质相互作用的复制压力有利于异染色质的形成。