Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Environ Microbiol. 2012 May;14(5):1145-58. doi: 10.1111/j.1462-2920.2011.02695.x. Epub 2012 Jan 20.
Six terrestrial ecosystems in the USA were exposed to elevated atmospheric CO(2) in single or multifactorial experiments for more than a decade to assess potential impacts. We retrospectively assessed soil bacterial community responses in all six-field experiments and found ecosystem-specific and common patterns of soil bacterial community response to elevated CO(2) . Soil bacterial composition differed greatly across the six ecosystems. No common effect of elevated atmospheric CO(2) on bacterial biomass, richness and community composition across all of the ecosystems was identified, although significant responses were detected in individual ecosystems. The most striking common trend across the sites was a decrease of up to 3.5-fold in the relative abundance of Acidobacteria Group 1 bacteria in soils exposed to elevated CO(2) or other climate factors. The Acidobacteria Group 1 response observed in exploratory 16S rRNA gene clone library surveys was validated in one ecosystem by 100-fold deeper sequencing and semi-quantitative PCR assays. Collectively, the 16S rRNA gene sequencing approach revealed influences of elevated CO(2) on multiple ecosystems. Although few common trends across the ecosystems were detected in the small surveys, the trends may be harbingers of more substantive changes in less abundant, more sensitive taxa that can only be detected by deeper surveys. Representative bacterial 16S rRNA gene clone sequences were deposited in GenBank with Accession No. JQ366086–JQ387568.
美国的六个陆地生态系统在单一或多因素实验中暴露于升高的大气 CO2 中超过十年,以评估潜在影响。我们回顾性地评估了所有六个田间实验中的土壤细菌群落反应,发现了土壤细菌群落对升高的 CO2 反应的生态系统特异性和共同模式。土壤细菌组成在六个生态系统中差异很大。虽然在个别生态系统中检测到了显著的反应,但没有在所有生态系统中发现升高的大气 CO2 对细菌生物量、丰富度和群落组成的共同影响。最引人注目的共同趋势是,在暴露于升高的 CO2 或其他气候因素的土壤中,酸杆菌组 1 细菌的相对丰度下降了多达 3.5 倍。在探索性 16S rRNA 基因克隆文库调查中观察到的酸杆菌组 1 反应在一个生态系统中通过 100 倍更深的测序和半定量 PCR 检测得到了验证。总的来说,16S rRNA 基因测序方法揭示了升高的 CO2 对多个生态系统的影响。尽管在小调查中检测到的生态系统之间的共同趋势很少,但这些趋势可能预示着更实质性的变化,在较少丰富、更敏感的分类群中,这些变化只能通过更深的调查来检测。代表细菌 16S rRNA 基因的克隆序列已在 GenBank 中以注册号 JQ366086-JQ387568 进行了提交。