• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

环状中间产物的序列易位是牛的颜色侧性的基础。

Serial translocation by means of circular intermediates underlies colour sidedness in cattle.

机构信息

Unit of Animal Genomics, GIGA-R & Faculty of Veterinary Medicine, University of Liège, 4000-Liège (Sart Tilman), Belgium.

出版信息

Nature. 2012 Feb 1;482(7383):81-4. doi: 10.1038/nature10757.

DOI:10.1038/nature10757
PMID:22297974
Abstract

Colour sidedness is a dominantly inherited phenotype of cattle characterized by the polarization of pigmented sectors on the flanks, snout and ear tips. It is also referred to as 'lineback' or 'witrik' (which means white back), as colour-sided animals typically display a white band along their spine. Colour sidedness is documented at least since the Middle Ages and is presently segregating in several cattle breeds around the globe, including in Belgian blue and brown Swiss. Here we report that colour sidedness is determined by a first allele on chromosome 29 (Cs(29)), which results from the translocation of a 492-kilobase chromosome 6 segment encompassing KIT to chromosome 29, and a second allele on chromosome 6 (Cs(6)), derived from the first by repatriation of fused 575-kilobase chromosome 6 and 29 sequences to the KIT locus. We provide evidence that both translocation events involved circular intermediates. This is the first example, to our knowledge, of a phenotype determined by homologous yet non-syntenic alleles that result from a novel copy-number-variant-generating mechanism.

摘要

颜色侧身性是一种牛的显性遗传表型,其特征是在侧腹、鼻子和耳朵尖端的色素区域发生极化。它也被称为“lineback”或“witrik”(意思是白色背部),因为颜色侧身的动物通常在脊柱上有一条白色带。颜色侧身性至少从中世纪就有记载,目前在全球的几个牛品种中分离出来,包括比利时蓝牛和瑞士褐牛。在这里,我们报告说颜色侧身性是由 29 号染色体上的第一个等位基因(Cs(29))决定的,它是由包含 KIT 的 6 号染色体 492 千碱基片段易位到 29 号染色体引起的,第二个等位基因(Cs(6))是由第一个等位基因通过融合的 6 号和 29 号染色体 575 千碱基序列归位到 KIT 基因座产生的。我们提供的证据表明,这两个易位事件都涉及环状中间体。这是我们所知的第一个由同源而非同线性等位基因决定的表型的例子,这些等位基因是由一种新的拷贝数变异生成机制产生的。

相似文献

1
Serial translocation by means of circular intermediates underlies colour sidedness in cattle.环状中间产物的序列易位是牛的颜色侧性的基础。
Nature. 2012 Feb 1;482(7383):81-4. doi: 10.1038/nature10757.
2
Molecular genetics of coat colour variations in White Galloway and White Park cattle.白加洛韦牛和白帕克牛毛色变异的分子遗传学
Anim Genet. 2013 Aug;44(4):450-3. doi: 10.1111/age.12029. Epub 2013 Feb 18.
3
Genomic analysis reveals a KIT-related chromosomal translocation associated with the white coat phenotype in yak.基因组分析揭示了牦牛中一种与白色被毛表型相关的KIT基因相关染色体易位。
J Anim Breed Genet. 2023 May;140(3):330-342. doi: 10.1111/jbg.12761. Epub 2023 Feb 15.
4
Colour-sidedness in Gloucester cattle is associated with a complex structural variant impacting regulatory elements downstream of KIT.格洛斯特牛的双色性与一个复杂的结构变异有关,该变异影响 KIT 下游的调控元件。
Anim Genet. 2020 Jun;51(3):461-465. doi: 10.1111/age.12932. Epub 2020 Apr 12.
5
Ectopic KIT copy number variation underlies impaired migration of primordial germ cells associated with gonadal hypoplasia in cattle (Bos taurus).牛(Bos taurus)中原始生殖细胞迁移受损与生殖腺发育不全相关,其原因是 KIT 基因的异位拷贝数变异。
PLoS One. 2013 Sep 26;8(9):e75659. doi: 10.1371/journal.pone.0075659. eCollection 2013.
6
Genetic effects on coat colour in cattle: dilution of eumelanin and phaeomelanin pigments in an F2-Backcross Charolais x Holstein population.牛毛色的遗传效应:夏洛莱牛与荷斯坦牛杂交F2回交群体中真黑素和褐黑素色素的稀释
BMC Genet. 2007 Aug 16;8:56. doi: 10.1186/1471-2156-8-56.
7
A complex structural variant at the KIT locus in cattle with the Pinzgauer spotting pattern.牛中具有平兹格斑纹的 KIT 基因座的复杂结构变异。
Anim Genet. 2019 Oct;50(5):423-429. doi: 10.1111/age.12821. Epub 2019 Jul 11.
8
The genetics of brown coat color and white spotting in domestic yaks (Bos grunniens).家养牦牛(Bos grunniens)棕色毛色和白色斑点的遗传学
Anim Genet. 2014 Oct;45(5):652-9. doi: 10.1111/age.12191. Epub 2014 Jul 3.
9
A non-coding regulatory variant in the 5'-region of the MITF gene is associated with white-spotted coat in Brown Swiss cattle.MITF基因5'区域的一个非编码调控变异与瑞士褐牛的白斑毛色相关。
Anim Genet. 2019 Feb;50(1):27-32. doi: 10.1111/age.12751. Epub 2018 Dec 2.
10
Temporal variation in coat colour (genotypes) supports major changes in the Nordic cattle population after Iron Age.毛色(基因型)的时间变化表明铁器时代后北欧牛种群发生了重大变化。
Anim Genet. 2016 Aug;47(4):495-8. doi: 10.1111/age.12445. Epub 2016 Jun 14.

引用本文的文献

1
Rare phenotypes of white coat color in Simmental calves: genetic causes of syndromic forms of albinism and depigmentation.西门塔尔牛犊白色毛色的罕见表型:白化病和色素脱失综合征形式的遗传原因。
Mol Genet Genomics. 2025 Sep 6;300(1):91. doi: 10.1007/s00438-025-02290-2.
2
A 14-bp motif in the KIT active promoter region is critical for melanin accumulation in yaks, mice, and humans.KIT活性启动子区域中的一个14碱基基序对牦牛、小鼠和人类的黑色素积累至关重要。
BMC Biol. 2025 Jul 9;23(1):208. doi: 10.1186/s12915-025-02311-x.
3
Translocations associated with colour-sidedness are common in northern Swedish cattle breeds.

本文引用的文献

1
Whole-genome comparison reveals novel genetic elements that characterize the genome of industrial strains of Saccharomyces cerevisiae.全基因组比较揭示了新型遗传元件,这些元件是工业酿酒酵母菌株基因组的特征。
PLoS Genet. 2011 Feb 3;7(2):e1001287. doi: 10.1371/journal.pgen.1001287.
2
Integrative genomics viewer.整合基因组浏览器。
Nat Biotechnol. 2011 Jan;29(1):24-6. doi: 10.1038/nbt.1754.
3
Analysis of copy number variations among diverse cattle breeds.分析不同牛种的拷贝数变异。
与毛色偏侧性相关的易位在瑞典北部牛品种中很常见。
Hereditas. 2025 Jul 7;162(1):122. doi: 10.1186/s41065-025-00481-w.
4
Initial Screening of Extrachromosomal Circular DNA Candidates for Pork Meat Quality Traits Using Circle-Seq and RNA-Seq Analysis.利用Circle-Seq和RNA-Seq分析对猪肉品质性状的染色体外环状DNA候选物进行初步筛选
Animals (Basel). 2025 May 29;15(11):1590. doi: 10.3390/ani15111590.
5
Where Did the Y Chromosome in the Spiny Rat Go, and How Did It Get There?刺鼠的Y染色体去了哪里,又是如何到达那里的?
Mol Biol Evol. 2025 Apr 30;42(5). doi: 10.1093/molbev/msaf102.
6
BRCA1-A and LIG4 complexes mediate ecDNA biogenesis and cancer drug resistance.BRCA1-A和LIG4复合物介导染色体外环状DNA的生物发生及癌症耐药性。
bioRxiv. 2025 Feb 23:2025.02.18.638901. doi: 10.1101/2025.02.18.638901.
7
Taurine pangenome uncovers a segmental duplication upstream of associated with depigmentation in white-headed cattle.牛磺酸泛基因组揭示了与白头牛色素脱失相关的上游片段重复。
Genome Res. 2025 Apr 14;35(4):1041-1052. doi: 10.1101/gr.279064.124.
8
Genetic advancements and future directions in ruminant livestock breeding: from reference genomes to multiomics innovations.反刍家畜育种的遗传进展与未来方向:从参考基因组到多组学创新
Sci China Life Sci. 2025 Apr;68(4):934-960. doi: 10.1007/s11427-024-2744-4. Epub 2024 Nov 26.
9
A large structural variant collection in Holstein cattle and associated database for variant discovery, characterization, and application.荷斯坦牛大型结构变异组库及相关数据库的建立,用于变异的发现、鉴定和应用。
BMC Genomics. 2024 Sep 30;25(1):903. doi: 10.1186/s12864-024-10812-2.
10
Identification and Characterization of Extrachromosomal Circular DNA in Slimming Grass Carp.鉴定和表征瘦身草鱼中的染色体外环状 DNA。
Biomolecules. 2024 Aug 23;14(9):1045. doi: 10.3390/biom14091045.
Genome Res. 2010 May;20(5):693-703. doi: 10.1101/gr.105403.110. Epub 2010 Mar 8.
4
Analysis of recent segmental duplications in the bovine genome.牛基因组中近期片段重复的分析。
BMC Genomics. 2009 Dec 1;10:571. doi: 10.1186/1471-2164-10-571.
5
Origins and functional impact of copy number variation in the human genome.人类基因组中拷贝数变异的起源和功能影响。
Nature. 2010 Apr 1;464(7289):704-12. doi: 10.1038/nature08516. Epub 2009 Oct 7.
6
Mechanisms of change in gene copy number.基因拷贝数变化的机制。
Nat Rev Genet. 2009 Aug;10(8):551-64. doi: 10.1038/nrg2593.
7
Fast and accurate short read alignment with Burrows-Wheeler transform.使用Burrows-Wheeler变换进行快速准确的短读比对。
Bioinformatics. 2009 Jul 15;25(14):1754-60. doi: 10.1093/bioinformatics/btp324. Epub 2009 May 18.
8
Genetic mapping of the belt pattern in Brown Swiss cattle to BTA3.瑞士褐牛带状花纹的遗传图谱定位到牛3号染色体。
Anim Genet. 2009 Apr;40(2):225-9. doi: 10.1111/j.1365-2052.2008.01826.x. Epub 2009 Jan 21.
9
Heterogeneous patterns of amplification of the NUP214-ABL1 fusion gene in T-cell acute lymphoblastic leukemia.T细胞急性淋巴细胞白血病中NUP214-ABL1融合基因的异质性扩增模式
Leukemia. 2009 Jan;23(1):125-33. doi: 10.1038/leu.2008.278. Epub 2008 Oct 16.
10
Highly effective SNP-based association mapping and management of recessive defects in livestock.基于单核苷酸多态性的高效家畜隐性缺陷关联图谱构建与管理
Nat Genet. 2008 Apr;40(4):449-54. doi: 10.1038/ng.96. Epub 2008 Mar 16.