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来自嗜热栖热放线菌的一种耐热DNA连接酶的表达、纯化、结晶及初步晶体学分析

Expression, purification, crystallization and preliminary crystallographic analysis of a thermostable DNA ligase from the archaeon Thermococcus sibiricus.

作者信息

Petrova T E, Bezsudnova E Y, Dorokhov B D, Slutskaya E S, Polyakov K M, Dorovatovskiy P V, Ravin N V, Skryabin K G, Kovalchuk M V, Popov V O

机构信息

Bach Institute of Biochemistry, RAS, Moscow, Russian Federation.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Feb 1;68(Pt 2):163-5. doi: 10.1107/S1744309111050913. Epub 2012 Jan 25.

Abstract

DNA ligases join single-strand breaks in double-stranded DNA by catalyzing the formation of a phosphodiester bond between adjacent 5'-phosphate and 3'-hydroxyl termini. Their function is essential to maintain the integrity of the genome in DNA replication, recombination and repair. A recombinant ATP-dependent DNA ligase from the hyperthermophilic anaerobic archaeon Thermococcus sibiricus was expressed in Escherichia coli and purified. Crystals were grown by vapour diffusion using the hanging-drop method with 17%(w/v) PEG 4000 and 8.5%(v/v) 2-propanol as precipitants. A diffraction experiment was performed with a single crystal, which diffracted X-rays to 3.0 Å resolution. The crystal belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 58.590, b = 87.540, c = 126.300 Å.

摘要

DNA连接酶通过催化相邻的5'-磷酸和3'-羟基末端之间形成磷酸二酯键来连接双链DNA中的单链断裂。它们的功能对于在DNA复制、重组和修复过程中维持基因组的完整性至关重要。一种来自嗜热厌氧古菌西伯利亚嗜热栖热菌的重组ATP依赖性DNA连接酶在大肠杆菌中表达并纯化。使用悬滴法通过气相扩散生长晶体,沉淀剂为17%(w/v)聚乙二醇4000和8.5%(v/v)异丙醇。用一个单晶进行衍射实验,该单晶将X射线衍射到3.0 Å分辨率。该晶体属于空间群P2(1)2(1)2(1),晶胞参数a = 58.590,b = 87.540,c = 126.300 Å。

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