Department of Molecular and Cell Biology, University of Texas at Dallas, Richardson, Texas 75080, USA.
Antioxid Redox Signal. 2012 Nov 1;17(9):1264-76. doi: 10.1089/ars.2012.4533. Epub 2012 Mar 8.
In bacteria, transcriptional responses to reactive oxygen and nitrogen species (ROS and RNS, respectively) are typically coordinated by regulatory proteins that employ metal centers or reactive thiols to detect the presence of those species. This review is focused on the structure, function and mechanism of three regulatory proteins (Fur, PerR, and NorR) that contain non-heme iron and regulate the transcription of target genes in response to ROS and/or RNS. The targets for regulation include genes encoding detoxification activities, and genes encoding proteins involved in the repair of the damage caused by ROS and RNS.
Three-dimensional structures of several Fur proteins and of PerR are revealing important details of the metal binding sites of these proteins, showing a surprising degree of structural diversity in the Fur family.
Discussion of the interaction of Fur with ROS and RNS will illustrate the difficulty that sometimes exists in distinguishing between true physiological responses and adventitious reactions of a regulatory protein with a reactive ligand.
Consideration of these three sensor proteins illuminates some of the key questions that remain unanswered, for example, the nature of the biochemical determinants that dictate the sensitivity and specificity of the interaction of the sensor proteins with their cognate signals.
在细菌中,对活性氧和氮物种(ROS 和 RNS)的转录反应通常由调节蛋白协调,这些调节蛋白利用金属中心或反应性硫醇来检测这些物种的存在。这篇综述专注于三种调节蛋白(Fur、PerR 和 NorR)的结构、功能和机制,它们含有非血红素铁,并且能够响应 ROS 和/或 RNS 调节靶基因的转录。调节的靶标包括编码解毒活性的基因,以及编码与 ROS 和 RNS 引起的损伤修复有关的蛋白质的基因。
几种 Fur 蛋白和 PerR 的三维结构揭示了这些蛋白质金属结合位点的重要细节,展示了 Fur 家族中惊人的结构多样性。
讨论 Fur 与 ROS 和 RNS 的相互作用将说明有时存在的区分真正的生理反应和调节蛋白与反应性配体的偶然反应之间的困难。
考虑这三种传感器蛋白阐明了一些仍然没有答案的关键问题,例如,决定传感器蛋白与其同源信号相互作用的灵敏度和特异性的生化决定因素的性质。