Negi Ss, Grover Ss, Rautela Ss, Rawat Ds, Gupta S, Khare S, Lal S, Rai A
Biotechnology & Biochemistry Division.
Iran J Microbiol. 2010 Jun;2(2):73-9.
Rapid clinical manifestation/progression of the meningococcal meningitis and lacunae in conventional bacteriological test often encourages indiscriminate use of antibiotics much before the etiology is established. Accordingly this study was planned to evaluate ctrA PCR for rapid molecular detection. In addition, multiplex PCR and sequencing was done for serogroup prediction to provide essential epidemiological and laboratory evidence for decision makers of health department of the country for choosing appropriate vaccine and phylogenetic analysis to establish its lineage.
73 CSF samples, collected from equal number of suspected cases, were investigated by both bacteriological (microscopy, culture, LA and drug sensitivity testing) as well as molecular tests i.e. PCR targeting conserved ctrA gene, multiplex PCR for serogroup characterization and DNA sequencing.
ctrA PCR revealed sensitivity, specificity, positive predictive value and negative predictive values of 93.15%, 100%,100%, and 88.23% respectively. Multiplex PCR based genogrouping followed by DNA sequencing, BLAST and phylogenetic analysis revealed complete homology with earlier submitted Neisseria meningitidis serogroup A strain Z2491 to suggest the sole involvement of only serogroup A in the outbreak. Two strains showed resistance to cefuroxime, ciprofloxacin, nalidixic acid. Only one strain showed resistance to ciprofloxacin, emphasizing the need for a constant surveillance system.
These diagnostic molecular tools are of paramount importance in establishing etiology, serogrouping, and epidemiological surveillance especially in developing countries like India.
脑膜炎球菌性脑膜炎临床表现迅速/病情进展快,且传统细菌学检测存在缺陷,这常常促使人们在病因明确之前就滥用抗生素。因此,本研究旨在评估ctrA PCR用于快速分子检测的效果。此外,还进行了多重PCR和测序以进行血清群预测,为该国卫生部门的决策者选择合适疫苗提供必要的流行病学和实验室依据,并进行系统发育分析以确定其谱系。
从相同数量的疑似病例中收集73份脑脊液样本,分别通过细菌学检测(显微镜检查、培养、乳胶凝集试验和药敏试验)以及分子检测,即针对保守ctrA基因的PCR、用于血清群鉴定的多重PCR和DNA测序进行研究。
ctrA PCR的敏感性、特异性、阳性预测值和阴性预测值分别为93.15%、100%、100%和88.23%。基于多重PCR的基因分型,随后进行DNA测序、BLAST和系统发育分析,结果显示与先前提交的A群脑膜炎奈瑟菌Z2491菌株完全同源,表明此次疫情仅由A群引起。两株菌株对头孢呋辛、环丙沙星、萘啶酸耐药。仅一株菌株对环丙沙星耐药,这凸显了持续监测系统的必要性。
这些诊断性分子工具对于确定病因、血清群分型和流行病学监测至关重要,尤其是在印度这样的发展中国家。